Results 11 to 20 of about 117,934 (343)
Nature Reviews Genetics, 2019 Clinical metagenomic next-generation sequencing (mNGS), the comprehensive analysis of microbial and host genetic material (DNA and RNA) in samples from patients, is rapidly moving from research to clinical laboratories. This emerging approach is changing
C. Chiu, Steve Miller
semanticscholar +5 more sources
Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software [PDF]
Nature Methods, 2017 Methods for assembly, taxonomic profiling and binning are key to interpreting metagenome data, but a lack of consensus about benchmarking complicates performance assessment.
A. Sczyrba +66 more
semanticscholar +11 more sources
Microbiome, 2019 Background Mosquitoes are the most important invertebrate viral vectors in humans and harbor a high diversity of understudied viruses, which has been shown in many mosquito virome studies in recent years.
Chenyan Shi +7 more
doaj +2 more sources
Metagenomics: An Effective Approach for Exploring Microbial Diversity and Functions
Foods, 2023 Various fields have been identified in the “omics” era, such as genomics, proteomics, transcriptomics, metabolomics, phenomics, and metagenomics. Among these, metagenomics has enabled a significant increase in discoveries related to the microbial world ...
N. N. Nam +3 more
semanticscholar +1 more source
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph [PDF]
Bioinform., 2014 MEGAHIT is a NGS de novo assembler for assembling large and complex metagenomics data in a time- and cost-efficient manner. It finished assembling a soil metagenomics dataset with 252 Gbps in 44.1 and 99.6 h on a single computing node with and without a ...
Dinghua Li +4 more
semanticscholar +1 more source
Metagenomics and antibiotics [PDF]
Clinical Microbiology and Infection, 2012 Most of the bacterial species that form part of the biosphere have never been cultivated. In this situation, a comprehensive study of bacterial communities requires the utilization of non-culture-based methods, which have been named metagenomics.
María Blanca Sánchez +3 more
openaire +2 more sources
A Primer on Metagenomics [PDF]
PLoS Computational Biology, 2010 Metagenomics is a discipline that enables the genomic study of uncultured microorganisms. Faster, cheaper sequencing technologies and the ability to sequence uncultured microbes sampled directly from their habitats are expanding and transforming our view of the microbial world.
Bourne, Philip E. +3 more
openaire +6 more sources
Metagenomics and probiotics [PDF]
Clinical Microbiology and Infection, 2012 The development of extensive sequencing methods has allowed metagenomic studies on the human gut microbiome to be carried out. This has tremendously increased our knowledge on gut microbiota composition and activity, allowing microbiota aberrations related to different diseases to be identified.
Gueimonde Fernández, Miguel +1 more
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DNA Research, 2022 AbstractVarious microorganisms exist in environments, and each of which has an optimal growth temperature (OGT). The relationship between genomic information and OGT of each species has long been studied, and one such study revealed that OGT of prokaryotes can be accurately predicted based on the fraction of seven amino acids (IVYWREL) among all ...
Masaomi Kurokawa +6 more
openaire +2 more sources
Advances in Metagenomics and Its Application in Environmental Microorganisms
Frontiers in Microbiology, 2021 Metagenomics is a new approach to study microorganisms obtained from a specific environment by functional gene screening or sequencing analysis.
Lu Zhang +12 more
semanticscholar +1 more source