Results 281 to 290 of about 117,934 (343)

Detection of parasites in food and water matrices by shotgun metagenomics: A narrative review. [PDF]

Food Waterborne Parasitol
Vatta P, Cacciò SM.
europepmc   +1 more source

Response of Fecal Bacteria and Fungi to Tannin‐Rich Diets in Sika Deer (Cervus nippon): Evidence from Both Feeding Experiments and Field Investigations

Integrative Zoology, EarlyView.
Feeding with tannin‐rich diets altered the fecal microbial composition and increased the relative abundance of tannin‐degrading microbes. We hypothesize that fecal bacteria and fungi may play important roles in helping herbivores adapt to tannin‐rich diets but respond to different tannin concentrations varies.
Di Zhu, Feng Wu, Peiying Wen, Haiyang Gao, Xiaoran Hao, Hongfang Wang   +5 more
wiley   +1 more source

Diverse circovirus-like genome architectures revealed by environmental metagenomics

, 2009
Karyna Rosario, Siobain Duffy, Mya Breitbart   +2 more
openalex   +1 more source

wholeskim: Utilising Genome Skims for Taxonomically Annotating Ancient DNA Metagenomes

Molecular Ecology Resources, EarlyView.
ABSTRACT Inferring community composition from shotgun sequencing of environmental DNA is highly dependent on the completeness of reference databases used to assign taxonomic information as well as the pipeline used. While the number of complete, fully assembled reference genomes is increasing rapidly, their taxonomic coverage is generally too sparse to
Lucas Elliott, Frédéric Boyer, Teo Lemane, PhyloAlps and PhyloNorway consortia, Inger Greve Alsos, Eric Coissac   +5 more
wiley   +1 more source

Francisella tularensis Subspecies holarctica in Stranded Beluga Whales, Cook Inlet, Alaska, USA. [PDF]

Emerg Infect Dis
Rouse N, Buttler J, Pabilonia K, Weller C, Respicio-Kingry L, Dietrich E, Petersen J, Kovalenko G, Bortz E, Huntington KB.   +9 more
europepmc   +1 more source

Discovery of [NiFe] Hydrogenase Genes in Metagenomic DNA: Cloning and Heterologous Expression in Thiocapsa roseopersicina

, 2009
Gergely Maróti, Tong Ying-kai, Shibu Yooseph, Holly Baden-Tillson, Hamilton O. Smith, Kornél L. Kovács, M.E. Frazier, J. Craig Venter, Qing Xu   +8 more
openalex   +1 more source

Enrichment of Helminth Mitochondrial Genomes From Faecal Samples Using Hybridisation Capture

Molecular Ecology Resources, EarlyView.
ABSTRACT New approaches are urgently needed to enrich rare or low‐abundant DNA in complex samples. Soil‐transmitted helminths (STHs) inhabit heterogeneous environments, including the gastrointestinal tract of their host as adults and are excreted as eggs and larvae in faeces, complicating our understanding of their biology and the use of genetic tools ...
Marina Papaiakovou, Andrea Waeschenbach, Roy M. Anderson, Piet Cools, Zeleke Mekonnen, D. Timothy J. Littlewood, Cinzia Cantacessi, Stephen R. Doyle   +7 more
wiley   +1 more source

Clinical implement of Probe-Capture Metagenomics in sepsis patients: A multicentre and prospective study. [PDF]

Clin Transl Med
Sun Q, Teng R, Shi Q, Liu Y, Cai X, Yang B, Cao Q, Shu C, Mei X, Zeng W, Hu B, Zhang J, Qiu H, Liu L.   +13 more
europepmc   +1 more source

Refining Zooplankton Diet Composition Studies Over Short and Long Time Scales by Combining 18S Metabarcoding With Fatty Acid Analyses

Molecular Ecology Resources, EarlyView.
ABSTRACT Understanding diet composition is essential for unravelling trophic interactions in aquatic ecosystems. DNA metabarcoding, utilising various variable regions of the 18S rRNA gene, is increasingly employed to investigate zooplankton diet composition.
Nora‐Charlotte Pauli, Katja Metfies, Stefan Neuhaus, Martin Graeve, Alison C. Cleary, Morten H. Iversen, Bettina Meyer   +6 more
wiley   +1 more source