Results 301 to 310 of about 117,934 (343)

Application of metagenomics sequencing to diagnose paralytic rabies with stroke-like onset: a case report. [PDF]

Front Med (Lausanne)
Lin B, Zhong D, Qin L, Liu Q, Wu L, Wang B, Wang K, Lu X, Deng S, Pan L.   +9 more
europepmc   +1 more source

Machine Learning Enables Alignment‐Free Distance Calculation and Phylogenetic Placement Using k‐Mer Frequencies

Molecular Ecology Resources, EarlyView.
ABSTRACT A key application of phylogenetics in ecological studies is identifying unknown sequences with respect to known ones. This goal can be formalised as assigning taxonomic labels or inserting sequences into a reference phylogenetic tree (phylogenetic placement). Much attention has been paid to the phylogenetic placement of short fragments used in
Eleonora Rachtman, Yueyu Jiang, Siavash Mirarab   +2 more
wiley   +1 more source

Metabolic potentials of the gut microbes in Antarctic krill (<i>Euphausia superba</i>). [PDF]

mSystems
Wei Z, Meng L, Du S, Wang F, Jiang A, Lu R, Liu K, Wang X, Xu Q, Mu X, Meng L, Shao C.   +11 more
europepmc   +1 more source

Coupling culturomics and metagenomics sequencing to characterize the gut microbiome of patients with cancer treated with immune checkpoint inhibitors. [PDF]

Gut Pathog
Diop K, Mbaye B, Nili S, Filin A, Benlaifaoui M, Malo J, Renaud AS, Belkaid W, Hunter S, Messaoudene M, Lee KA, Elkrief A, Routy B.   +12 more
europepmc   +1 more source

The Nasal Microbiome and Associations With Environmental Exposures and Respiratory Health

Allergy, EarlyView.
This study evaluates the association of the nasal microbiome with air pollutants, meteorological conditions, and respiratory health in adolescents. Bacterial diversity is positively associated with hay fever and short‐term NO2 exposure, and negatively with temperature. A Moraxella‐dominated nasotype is linked to lower O3 exposure and higher temperature
Javier Perez‐Garcia, Anne K. Bozack, Sheryl L. Rifas‐Shiman, Yanjiao Zhou, Joanne Sordillo, Brent Coull, Heike Luttmann‐Gibson, Joel Schwartz, Marie‐France Hivert, Emily Oken, Diane R. Gold, Andres Cardenas   +11 more
wiley   +1 more source

Bioinformatics Research in Bacterial Genomics and Metagenomics. [PDF]

Curr Issues Mol Biol
Baev V.
europepmc   +1 more source

Alterations in Gut Microbiota and Metabolism in Cirrhotic Portal Hypertension: Implications for Disease Progression

Alimentary Pharmacology &Therapeutics, EarlyView.
In‐depth multiomics analyses revealed that the gut microbiota in patients with CPH is dysbiotic. Altered gut microbiota plays an important role in the progression of CPH and affects the host's arginine metabolism to promote arginine biosynthesis. The pro‐inflammatory effects of certain gut bacteria induce iNOS expression, which together act on the ...
Qun Zhang, Jinghua Cui, Yixin Hou, Lining Guo, Hai Li, Guiqin Zhou, Xiaojing Wang, Bingbing Zhu, Ke Shi, Yi Zhang, Yufei Bi, Yanqiu Li, Lina Sun, Ying Feng, Jing Yuan, Xianbo Wang   +15 more
wiley   +1 more source

Metagenomics reveals contrasted responses of microbial communities to wheat straw amendment in cropland and grassland soils. [PDF]

Sci Rep
Jarrige D, Tardy V, Loux V, Rué O, Chabbi A, Terrat S, Maron PA.   +6 more
europepmc   +1 more source

The Gut Microbiome Obesity Index: A New Analytical Tool in the Metagenomics Workflow for the Evaluation of Gut Dysbiosis in Obese Humans. [PDF]

Nutrients
Kulecka M, Jaworski P, Zeber-Lubecka N, Bałabas A, Piątkowska M, Czarnowski P, Frączek B, Tarnowski W, Mikula M, Ostrowski J.   +9 more
europepmc   +1 more source