Results 301 to 310 of about 149,337 (415)

Navigating Past Oceans: Comparing Metabarcoding and Metagenomics of Marine Ancient Sediment Environmental DNA

Molecular Ecology Resources, EarlyView.
ABSTRACT The condition of ancient marine ecosystems provides context for contemporary biodiversity changes in human‐impacted oceans. Sequencing sedimentary ancient DNA (sedaDNA) is an emerging method for generating high‐resolution biodiversity time‐series data, offering insights into past ecosystems.
Luke E. Holman, Giulia Zampirolo, Richard Gyllencreutz, James Scourse, Tobias Frøslev, Christian Carøe, Shyam Gopalakrishnan, Mikkel Winther Pedersen, Kristine Bohmann   +8 more
wiley   +1 more source

Antimicrobial resistance genes in the oral microbiome. [PDF]

Evid Based Dent
Dave M, Tattar R.
europepmc   +1 more source

Metagenomic approaches to natural products from free-living and symbiotic organisms [PDF]

, 2009
Sean F. Brady, Luke Simmons, Jeffrey H. Kim, Eric W. Schmidt   +3 more
openalex   +1 more source

Evaluating the Benefits and Limits of Multiple Displacement Amplification With Whole‐Genome Oxford Nanopore Sequencing

Molecular Ecology Resources, EarlyView.
ABSTRACT Multiple displacement amplification (MDA) outperforms conventional PCR in long fragment and whole‐genome amplification, making it attractive to couple MDA with long‐read sequencing of samples with limited quantities of DNA to obtain improved genome assemblies.
Fiifi Agyabeng‐Dadzie, Megan S. Beaudry, Alex Deyanov, Haley Slanis, Minh Q. Duong, Randi Turner, Asis Khan, Cesar A. Arias, Jessica C. Kissinger, Travis C. Glenn, Rodrigo de Paula Baptista   +10 more
wiley   +1 more source

Critical Steps in Shotgun Metagenomics-Based Diagnosis of Bloodstream Infections Using Nanopore Sequencing. [PDF]

APMIS
Björnberg A, Nestor D, Peker N, Sinha B, Couto N, Rossen J, Sundqvist M, Mölling P.   +7 more
europepmc   +1 more source

EntoSieve: Automated Size‐Sorting of Insect Bulk Samples to Aid Accurate Megabarcoding and Metabarcoding

Molecular Ecology Resources, EarlyView.
ABSTRACT Widespread insect decline necessitates the development and use of standardized protocols for regular monitoring. These methods have to be rapid, efficient and cost‐effective to allow for large‐scale implementation. Many insect sampling and molecular methods have been developed.
Aleida Ascenzi, Lorenz Wührl, Vivian Feng, Nathalie Klug, Christian Pylatiuk, Pierfilippo Cerretti, Rudolf Meier   +6 more
wiley   +1 more source

Analytical assessment of metagenomic workflows for pathogen detection with NIST RM 8376 and two sample matrices. [PDF]

Microbiol Spectr
Kralj JG, Servetas SL, Forry SP, Hunter ME, Dootz JN, Jackson SA.   +5 more
europepmc   +1 more source

WebCARMA: a web application for the functional and taxonomic classification of unassembled metagenomic reads [PDF]

, 2009
Wolfgang Gerlach, Sebastian Jünemann, Felix Tille, Alexander Goesmann, Jens Stoye   +4 more
openalex   +1 more source

Letter to the editor regarding the article, “Metagenomic and transcriptomic analysis reveals crosstalk between intratumor mycobiome and hosts in early‐stage nonsmoking lung adenocarcinoma patients”

Precision Medical Sciences, EarlyView.
Xiaobo Xie
wiley   +1 more source

Short Read Lengths Recover Ecological Patterns in 16S rRNA Gene Amplicon Data

Molecular Ecology Resources, EarlyView.
ABSTRACT 16S rRNA gene metabarcoding, the study of amplicon sequences of the 16S rRNA gene from mixed environmental samples, is an increasingly popular and accessible method for assessing bacterial communities across a wide range of environments. As metabarcoding sequence data archives continue to grow, data reuse will likely become an important source
Stephanie D. Jurburg
wiley   +1 more source