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The Mitogenome Relationships and Phylogeography of Barn Swallows (Hirundo rustica) [PDF]

Molecular biology and evolution, 2022
The barn swallow (Hirundo rustica) poses a number of fascinating scientific questions, including the taxonomic status of postulated subspecies. Here, we obtained and assessed the sequence variation of 411 complete mitogenomes, mainly from the European H.
Gianluca Lombardo, Nicola Rambaldi Migliore, G. Colombo, M. Capodiferro, G. Formenti, M. Caprioli, E. Moroni, L. Caporali, H. Lancioni, Simona Secomandi, G. Gallo, A. Costanzo, A. Romano, M. Garofalo, Cristina Cereda, V. Carelli, Lauren Gillespie, Yang Liu, Yosef Kiat, A. Marzal, Cosme López-Calderón, J. Balbontín, Timothy A Mousseau, P. Matyjasiak, A. Møller, O. Semino, R. Ambrosini, A. B. Alquati, D. Rubolini, L. Ferretti, A. Achilli, L. Gianfranceschi, Anna Olivieri, A. Torroni   +33 more
semanticscholar   +2 more sources

Highly active repeat-mediated recombination in the mitogenome of the holoparasitic plant Aeginetia indica

Frontiers in Plant Science, 2022
Mitogenomes of most flowering plants evolve slowly in sequence, but rapidly in structure. The rearrangements in structure are mainly caused by repeat-mediated recombination.
Y. Zhong, Runxian Yu, Jingfang Chen, Ying Liu, R. Zhou   +4 more
semanticscholar   +2 more sources

Complete mitogenome assemblies from a panel of 13 diverse potato taxa

Mitochondrial DNA. Part B. Resources, 2021
Mitochondrial DNA is maternally inherited and is shown to affect nuclear–cytoplasmic interactions in potato. Analyzing the mitogenome helps understand the evolutionary relationships and improve breeding programs in potato.
Sai Reddy Achakkagari, Ilayda Bozan, Noelle L. Anglin, David Ellis, Helen H. Tai, Martina V. Strömvik   +5 more
doaj   +2 more sources

Comparative analysis of the chloroplast and mitochondrial genomes of Saposhnikovia divaricata revealed the possible transfer of plastome repeat regions into the mitogenome

BMC Genomics, 2022
Background Saposhnikovia divaricata (Turcz.) Schischk. is a perennial herb whose dried roots are commonly used as a source of traditional medicines.
Yang Ni, Jingling Li, Haimei Chen, Jingwen Yue, Pinghua Chen, Chang Liu   +5 more
doaj   +2 more sources

The Value of Whole-Genome Sequencing for Mitochondrial DNA Population Studies: Strategies and Criteria for Extracting High-Quality Mitogenome Haplotypes [PDF]

International Journal of Molecular Sciences, 2022
Whole-genome sequencing (WGS) data present a readily available resource for mitochondrial genome (mitogenome) haplotypes that can be utilized for genetics research including population studies. However, the reconstruction of the mitogenome is complicated
K. Sturk-Andreaggi, J. D. Ring, A. Ameur, U. Gyllensten, Martin Bodner, W. Parson, Charla Marshall, M. Allen   +7 more
semanticscholar   +2 more sources

Comparative mitogenome analysis of two ectomycorrhizal fungi (Paxillus) reveals gene rearrangement, intron dynamics, and phylogeny of basidiomycetes [PDF]

IMA Fungus, 2020
In this study, the mitogenomes of two Paxillus species were assembled, annotated and compared. The two mitogenomes of Paxillus involutus and P. rubicundulus comprised circular DNA molecules, with the size of 39,109 bp and 41,061 bp, respectively ...
Qiang Li, Yuanhang Ren, Dabing Xiang, Xiaodong Shi, Jianglin Zhao, Lianxin Peng, Gang Zhao   +6 more
semanticscholar   +2 more sources

Comparative analysis of the mitogenomes of multiple species of Fagaceae, with special focus on Quercus gilva [PDF]

BMC Plant Biology
Background Quercus, as the most abundant and widely distributed genus within the family Fagaceae, has been extensively studied at nuclear genome and plastome. However, mitogenome studies in Quercus remain scarce.
Yu Li, Si-Si Zheng, Gregor Kozlowski, Yi-Gang Song   +3 more
doaj   +2 more sources

Evolutionary Analysis of Mitogenomes from Parasitic and Free-Living Flatworms [PDF]

, 2015
Copyright: © 2015 Solà et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source ...
A Marín, A Necşulea, AR Wey-Fabrizius, C Gissi, CM Barr, Cristina Frías-López, D Laslett, D. Timothy J. Littlewood, DC Shields, DS Lawrie, E Solà, Eduard Solà, ERM Tillier, F Abascal, F Wright, G Bernardi, H Chen, H Yamasaki, H-K Jeon, Hector Escriva, I Ruiz-Trillo, J Boore, J Zhang, Julio Rozas, JWO Ballard, JWO Ballard, L Bromham, LR Castro, M Bernt, M Dowton, M Nakao, M Riutort, M Sakai, M Stöck, M Weber, M Woolfit, M Álvarez-Presas, M Álvarez-Presas, Marta Riutort, Marta Álvarez-Presas, MJ Telford, MP Francino, NT Perna, P Chomczynski, P Schattner, PM Sharp, R Schmieder, R Sluys, RD Page, S Breton, S Kang, S Wei, SK Wyman, SM Huse, T Huyse, T Huyse, T Le, T Le, TH Le, Y Bessho, Y Bessho, Y-P Poh   +61 more
core   +20 more sources

Variation in mitogenome structural conformation in wild and cultivated lineages of sorghum corresponds with domestication history and plastome evolution

BMC Plant Biology, 2023
Background Mitochondria are organelles within eukaryotic cells that are central to the metabolic processes of cellular respiration and ATP production. However, the evolution of mitochondrial genomes (mitogenomes) in plants is virtually unknown compared ...
Shuo Zhang, Jie Wang, Wenchuang He, S. Kan, Xuezhu Liao, D. Jordan, E. Mace, Y. Tao, A. Cruickshank, Robert Klein, Daojun Yuan, L. R. Tembrock, Zhiqiang Wu   +12 more
semanticscholar   +1 more source

Complete mitochondrial genome of Thuja sutchuenensis and its implications on evolutionary analysis of complex mitogenome architecture in Cupressaceae

BMC Plant Biology, 2023
Background The complex physical structure and abundant repeat sequences make it difficult to assemble the mitogenomes of seed plants, especially gymnosperms. Only approximately 33 mitogenomes of gymnosperms have been reported. However, as the most widely
Changying Xia, Jingling Li, Youwei Zuo, P. He, Huan Zhang, Xiaoxia Zhang, Binru Wang, Jiabin Zhang, Jie Yu, H. Deng   +9 more
semanticscholar   +1 more source