Results 71 to 80 of about 139,601 (221)

Complete mitogenome of Gymnocorymbus ternetzi (Characiformes: Characidae: Gymnocorymbus) and phylogenetic implications

, 2021
Gymnocorymbus ternetzi belongs to the genus Gymnocorymbus in the family Characidae, and is mainly distributed in southern Brazil. Herein, we report the complete mitogenome of G. ternetzi using Illumina sequencing data.
Shang Pan, Jie Chen, Qunyin Zhu, Xiaohan Su, Site Luo, Ziming Liu   +5 more
core   +1 more source

Budding speciation, mitochondrial capture and introgression between surface and cave lineages in the Asellus aquaticus species complex

Cladistics, EarlyView.
Abstract Replicated pairs of ancestral and evolutionarily derived populations provide opportunities to test hypotheses about the deterministic laws of evolution. The Asellus aquaticus species complex is an invertebrate model system with several independent surface‐to‐cave transitions and a complicated and unresolved evolutionary history.
Peter Trontelj, Valerija Zakšek, Anja Palandačić, Hans Recknagel   +3 more
wiley   +1 more source

Assembly and phylogenetic analysis of the mitogenome of Piophila megastigmata (Diptera: Piophilidae), a forensically important species

, 2022
Piophila megastigmata (McAlpine, 1978) (Diptera: Piophilidae) is a forensically important species, but it was not found in China until recently. In this study, the first complete mitogenome of P.
Zhang, Yanan, Yanan Zhang, Jiangfeng Wang, Yinghui Wang, Wang, Yu, Li, Liangliang, Liangliang Li, Wang, Jiangfeng, Xu, Wang, Kang, Chengtao, Wang, Yinghui, Chengtao Kang, Yu Wang, Wang Xu   +13 more
core   +1 more source

Comparative mitogenomics of Clitellata reveals mitogenome organization can affect the mode of phylogeny

Turkish Journal of Zoology
Clitellata is a major clade of Annelida that includes almost all freshwater and terrestrial annelids as well as many marine species. Aquatic oligochaetes include the union of the two multispecies families: Naididae and Tubificidae. There has been much debate regarding the phylogeny and classification of the cosmopolitan and diverse Naididae. In this
Mercan, Deniz, Horenkamp, Austin, Aydemir, Merve Nur, Aydemir, Habeş Bilal, Neubig, Kurt, Arslan, Naime, Anderson, Frank E.   +6 more
openaire   +3 more sources

Unravelling the phylogeny of armadillos and their kin (Mammalia, Xenarthra, Cingulata) combining morphological, molecular, and stratigraphic data

Cladistics, EarlyView.
Abstract Cingulata, a major lineage of Xenarthra, comprises extinct and extant armoured placental mammals that diversified throughout the Cenozoic. Despite extensive study, phylogenetic hypotheses based on morphological and molecular data remain incongruent, and no total evidence analysis has been conducted. Here, we integrate the largest morphological
Daniel M. Casali, Mariela C. Castro, Martin R. Ciancio, Timothy J. Gaudin, Jeremy L. Bramblett, Alberto Boscaini, Fernando A. Perini, Max C. Langer   +7 more
wiley   +1 more source

The complete mitochondrial genome of Exopalaemon annandalei

Mitochondrial DNA. Part B. Resources, 2018
In this study, the complete mitochondrial genome (mitogenome) of Exopalaemon annandalei was amplified and analyzed. The mitogenome is 15,718 bp in length, encoding 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA genes, and a control region (CR ...
YiMing Yuan, YanLong He, ShouHai Liu, Xiao Ji, YuTao Qin, XiaoBo Wang   +5 more
doaj   +1 more source

Mitogenomic phylogeny of Tetrigoidea (Insecta, Orthoptera), with a focus on the genus Zhengitettix [PDF]

PeerJ
The mitochondrial genome (mitogenome) has been widely used to infer the phylogeny, origin and evolution of Orthopteran insects. Although several mitogenomic data have been used to study the phylogenetic relationships of Tetrigoidea (Orthoptera), the ...
Xuejuan Li, Wenli Dou, Liliang Lin
doaj   +2 more sources

Preprocessing missing data and partitions for phylogenetic analysis under dynamic homology, with application to museomics and phylogenomics

Cladistics, EarlyView.
Abstract In dynamic homology, data must usually be preprocessed to distinguish sequencing artefacts (missing data) from insertion–deletion events, but empirical studies using POY/PhyG have employed manual preprocessing. Here, we compare different procedures for handling missing data for dynamic homology, present Python scripts to automate these ...
Daniel Yudi Miyahara Nakamura, Taran Grant, Ward C. Wheeler   +2 more
wiley   +1 more source

Additional file 1 of Mitochondrial phylogenomics of Acanthocephala: nucleotide alignments produce long-branch attraction artefacts

, 2022
Additional file 1: Table S1. Primers used for the amplification and sequencing of the mitogenome of M. dakusuiensis. Table S2. The architecture of the mitogenome of M. dakusuiensis. Text S1. Evolutionary models and partitions. Figure S1.
Xi-Ping Yuan (13984173), Rui Song (331963), Zhong-Yuan Chen (4987775), Chuan-Yu Xiang (13984176), Yuan-An Wu (13984179), Hao Wu (65943), Min Xie (273315), Dong-Sheng Ou (13984182), Jin-Wei Gao (13984170)   +8 more
core   +1 more source

Phylogenomics of the American robin (Turdus migratorius) reveals hidden lineages and introgression

Journal of Systematics and Evolution, EarlyView.
Phylogenomic analyses of Turdus migratorius uncover four previously unrecognized lineages, including a divergent Baja California lineage (T. m. confinis). The results reveal complex evolutionary relationships that depart from simple models of continuous divergence, supported by evidence of introgression between the Mexican lineage and its previously ...
Wendoly Rojas‐Abreu, Christen M. Bossu, Luz E. Zamudio‐Beltrán, Borja Milá, Kristen Ruegg, Blanca E. Hernández‐Baños   +5 more
wiley   +1 more source