Results 11 to 20 of about 6,067,666 (328)

Programmatic modeling for biological systems

open access: yesCurrent Opinion in Systems Biology, 2021
AbstractComputational modeling has become an established technique to encode mathematical representations of cellular processes and gain mechanistic insights that drive testable predictions. These models are often constructed using graphical user interfaces or domain-specific languages, with SBML used for interchange.
Alexander L.R. Lubbock, Carlos F. Lopez
openaire   +2 more sources

Molecular Modeling for Biological Systems [PDF]

open access: bronzeChemical & Engineering News Archive, 1989

openalex   +2 more sources

Multi-scale analysis and modelling of collective migration in biological systems

open access: yesPhilosophical Transactions of the Royal Society of London. Biological Sciences, 2020
Collective migration has become a paradigm for emergent behaviour in systems of moving and interacting individual units resulting in coherent motion. In biology, these units are cells or organisms.
A. Deutsch   +3 more
semanticscholar   +1 more source

All Driven by Energy Demand? Integrative Comparison of Metabolism of Enterococcus faecalis Wildtype and a Glutamine Synthase Mutant

open access: yesMicrobiology Spectrum, 2022
Lactic acid bacteria (LAB) play a significant role in biotechnology, e.g., food industry and also in human health. Many LAB genera have developed a multidrug resistance in the past few years, causing a serious problem in controlling hospital germs ...
Seyed Babak Loghmani   +11 more
doaj   +1 more source

A Minimal OO Calculus for Modelling Biological Systems [PDF]

open access: yesElectronic Proceedings in Theoretical Computer Science, 2011
In this paper we present a minimal object oriented core calculus for modelling the biological notion of type that arises from biological ontologies in formalisms based on term rewriting.
Livio Bioglio
doaj   +1 more source

Aspects of multiscale modelling in a process algebra for biological systems [PDF]

open access: yesElectronic Proceedings in Theoretical Computer Science, 2010
We propose a variant of the CCS process algebra with new features aiming at allowing multiscale modelling of biological systems. In the usual semantics of process algebras for modelling biological systems actions are instantaneous.
Roberto Barbuti   +4 more
doaj   +1 more source

Modelling Biological Systems: A New Algorithm for the Inference of Boolean Networks

open access: yesMathematics, 2021
Biological systems are commonly constituted by a high number of interacting agents. This great dimensionality hinders biological modelling due to the high computational cost.
Mario Rubio-Chavarría   +3 more
doaj   +1 more source

Review of Mathematical Modelling Techniques with Applications in Biosciences

open access: yesIraqi Journal for Computer Science and Mathematics, 2022
Modelling can provide intellectual frameworks that are necessary to translate data into knowledge. Mathematical modelling has played an important role in many applications, such as ecology, genetics, engineering, psychology, sociology, physics and ...
ahmed hasan   +2 more
doaj   +1 more source

Modelling Biological Systems with Competitive Coherence

open access: yesAdvances in Artificial Neural Systems, 2012
Many living systems, from cells to brains to governments, are controlled by the activity of a small subset of their constituents. It has been argued that coherence is of evolutionary advantage and that this active subset of constituents results from ...
V. Norris, M. Engel, M. Demarty
semanticscholar   +1 more source

The physics of higher-order interactions in complex systems [PDF]

open access: yesNature Physics, 2021
Complex networks have become the main paradigm for modelling the dynamics of interacting systems. However, networks are intrinsically limited to describing pairwise interactions, whereas real-world systems are often characterized by higher-order ...
F. Battiston   +13 more
semanticscholar   +1 more source

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