Results 41 to 50 of about 6,067,666 (328)
A Graphical Approach for Hybrid Simulation of 3D Diffusion Bio-Models via Coloured Hybrid Petri Nets
Modelling and Simulation in Engineering, 2020 Three-dimensional modelling of biological systems is imperative to study the behaviour of dynamic systems that require the analysis of how their components interact in space. However, there are only a few formal tools that offer a convenient modelling of
Amr Ismail +3 more
doaj +1 more source
The finding and researching algorithm for potentially oscillating enzymatic systems
Вавиловский журнал генетики и селекции, 2021 Many processes in living organisms are subject to periodic oscillations at different hierarchical levels of their organization: from molecular-genetic to population and ecological. Oscillatory processes are responsible for cell cycles in both prokaryotes
T. N. Lakhova +3 more
doaj +1 more source
Reproducibility in systems biology modelling
bioRxiv, 2020 The reproducibility crisis has emerged as an important concern across many fields of science including life science, since many published results failed to reproduce.
Krishna Tiwari +13 more
semanticscholar +1 more source
FEBS Letters, EarlyView.Enteropathogenic E. coli (EPEC) infects the human intestinal epithelium, resulting in severe illness and diarrhoea. In this study, we compared the infection of cancer‐derived cell lines with human organoid‐derived models of the small intestine. We observed a delayed in attachment, inflammation and cell death on primary cells, indicating that host ...
Mastura Neyazi +5 more
wiley +1 more source
piecewiseSEM: Piecewise structural equation modelling in r for ecology, evolution, and systematics [PDF]
, 2015 Ecologists and evolutionary biologists rely on an increasingly sophisticated set of statistical tools to describe complex natural systems. One such tool that has gained significant traction in the biological sciences is structural equation models (SEM ...
J. Lefcheck
semanticscholar +1 more source
FEBS Letters, EarlyView.Angiotensin II (AngII), a neuropeptide, interacts with amyloid‐β (Aβ), a key player in Alzheimer's disease. This study reveals that AngII reduces Aβ aggregation and membrane disruption in vitro. Biophysical assays and molecular modeling suggest AngII binds disordered Aβ forms, potentially modulating early amyloidogenic events and contributing to ...
Mohsen Habibnia +5 more
wiley +1 more source
Journal of Applied Biomaterials & Functional Materials, 2023 Physiological parameters of the oral cavity have a profound impact on any restorative solutions designed for edentulous patients including denture adhesives.
Anantha Narayanan Ramakrishnan +5 more
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Biological applications of knowledge graph embedding models
Briefings Bioinform., 2020 Complex biological systems are traditionally modelled as graphs of interconnected biological entities. These graphs, i.e. biological knowledge graphs, are then processed using graph exploratory approaches to perform different types of analytical and ...
Sameh K. Mohamed, A. Nounu, V. Nováček
semanticscholar +1 more source
FEBS Letters, EarlyView.Cells must clear mislocalized or faulty proteins from membranes to survive. The AAA+ ATPase Msp1 performs this task, but dissecting how its six subunits work together is challenging. We engineered linked dimers with varied numbers of functional subunits to reveal how Msp1 subunits cooperate and use energy to extract proteins from the lipid bilayer ...
Deepika Gaur +5 more
wiley +1 more source
VTR: A Web Tool for Identifying Analogous Contacts on Protein Structures and Their Complexes
Frontiers in Bioinformatics, 2021 Evolutionarily related proteins can present similar structures but very dissimilar sequences. Hence, understanding the role of the inter-residues contacts for the protein structure has been the target of many studies.
Vitor Pimentel +7 more
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