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Molecular docking using grid computing
2007International ...
Tantar, Alexandru-Adrian+2 more
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Molecular Docking Studies of Curcumin
2020Computation, such as high-throughput screening and virtual screening, which are essential tools of modern drug discovery research, has an important role in drug discovery. Molecular docking is an in silico method used to develop the homology model for a novel drug candidate.
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Web Services for Molecular Docking Simulations
2019Docking process is one of the most significant activities for the analysis of protein-protein or protein-ligand complexes. These tools have become of unique importance when allocated in web services, collaborating scientifically with several areas of knowledge in an interdisciplinary way.
Nelson José Freitas da Silveira+3 more
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Parameter Refinement for Molecular Docking
Journal of Chemical Information and Computer Sciences, 1998Finding the optimal parameter values for any computer program with adjustable parameters can be very time consuming. In this paper, we introduce the use of the Plackett−Burman and the central composite designs with the aid of the partial least squares method to tackle this problem.
Jukka-Pekka Salo+2 more
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Molecular mechanism of secretory vesicle docking
Biochemical Society Transactions, 2010Docking, the stable association of secretory vesicles with the plasma membrane, is considered to be the necessary first step before vesicles gain fusion-competence, but it is unclear how vesicles dock. In adrenal medullary chromaffin cells, access of secretory vesicles to docking sites is controlled by dense F-actin (filamentous actin) beneath the ...
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Fast Molecular Docking Methods
1998Molecular biologists, biochemists, and biophysicists are often faced with the problem of trying to determine how two molecules might interact. This information is necessary for a fundamental understanding of the mechanisms of biology, but can be very difficult to extract.
Jeffrey G. Mandell+4 more
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Molecular docking is a computational approach used to model the structural complexes that arise from the interactions between two or more molecules. Its main goal is to predict the three-dimensional configuration of the target molecule, making it a vital technique in the realm of drug development.
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Virtual screening by molecular docking [PDF]
The growing number of genomic targets of therapeutic interest (HOPKINS and GROOM, 2002) and macromolecules (proteins, nucleic acids) for which a threedimensional structure (3D) is available (BERMAN et al., 2000) makes the techniques of virtual screening increasingly attractive for projects aiming to identify bioactive molecules (WALTERS et al., 1998 ...
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