Results 251 to 260 of about 6,867,350 (304)

Loss of AMBRA1 activates MAPK and angiogenesis signaling pathways in melanoma cells

FEBS Open Bio, EarlyView.
Loss of AMBRA1 in melanoma cells activates multiple oncogenic pathways associated with tumor progression. Transcriptomic and protein network analyses revealed that AMBRA1 depletion enhances MAPK/ERK signaling, angiogenesis, TGF‐β/EMT signaling, and Wnt/axon guidance pathways.
Milad Ibrahim, Marco Corazzari, Iman Osman, Jane Armstrong, Noel Carter   +4 more
wiley   +1 more source

Protein language model-generated enzyme sequences exhibit high stability in molecular dynamics simulations. [PDF]

Front Artif Intell
Fassi EMA, Nicolini M, Saitto E, Valentini G, Casiraghi E, Grazioso G.   +5 more
europepmc   +1 more source

Effects of IGFBP4 deficiency on human preadipocyte proliferation and differentiation through the IGF1R/AKT pathway

FEBS Open Bio, EarlyView.
IGFBP4 knockdown (KD) impairs preadipocyte proliferation and is associated with IGF1R protein downregulation and attenuated AKT phosphorylation. The mechanisms by which IGFBP4 KD influences the IGF1R/AKT signaling pathway involve newly synthesized proteins and lysosomal degradation pathways. Created in BioRender.
Yujia Guo, Sandy Richter, Christoph Bach, Wieland Kiess, Anna Kirstein, Diana Le Duc, Antje Garten   +6 more
wiley   +1 more source

Quantum geometrical molecular dynamics. [PDF]

Sci Adv
Xie Y, Liu R, Gu B.
europepmc   +1 more source

Dynamical Nonequilibrium Molecular Dynamics Simulations Reveal Atomistic Steps of C-Type Inactivation in Cardiac hERG Channels. [PDF]

J Am Chem Soc
Costa F, Bassetto C, Bezanilla F, Giacomello A.   +3 more
europepmc   +1 more source

Ab Initio Molecular Dynamics Simulations for Organic Chemists─It is About Time! [PDF]

J Am Chem Soc
Nielsen MM, Wagen CC, Gomes LA, Tantillo DJ, Lopez SA, Jacobsen EN.   +5 more
europepmc   +1 more source

Comparative molecular dynamics of two cyclic peptide inhibitors bound to the Zika virus NS2B/NS3 protease. [PDF]

J Mol Model
Marinho CVS, de Oliveira MVD, Lima AH.
europepmc   +1 more source

Predicting the Self-Diffusion Coefficient of Atmospheric Organic Aerosol Components via Molecular Dynamics Simulations. [PDF]

ACS Omega
Siachouli P, Mavrantzas VG, Pandis SN.
europepmc   +1 more source

Molecular Dynamics Simulations Suggest Folded Chain Ends Compatible with the Cellulose-II Fibril Structure. [PDF]

Biomacromolecules
Kong L, Eichhorn SJ, Bryce RA.
europepmc   +1 more source

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Molecular dynamics simulations

Current Opinion in Structural Biology, 2002
Molecular dynamics simulations have become a standard tool for the investigation of biomolecules. Simulations are performed of ever bigger systems using more realistic boundary conditions and better sampling due to longer sampling times. Recently, realistic simulations of systems as complex as transmembrane channels have become feasible.
Hansson T, Oostenbrink C, van Gunsteren W   +2 more
openaire   +4 more sources