Results 151 to 160 of about 393,868 (257)

Tumor mutational burden as a determinant of metastatic dissemination patterns

Molecular Oncology, EarlyView.
This study performed a comprehensive analysis of genomic data to elucidate whether metastasis in certain organs share genetic characteristics regardless of cancer type. No robust mutational patterns were identified across different metastatic locations and cancer types.
Eduardo Candeal, Andrea Moreno‐Manuel, Miguel Salvadó‐Pertierra, Cristina Santos‐Vivas, Rebeca Sanz‐Pamplona   +4 more
wiley   +1 more source

Beyond Single Variants: A Pathway-Based Approach to Explore the Genetic Basis of Memory. [PDF]

Mol Neurobiol
van Beek D, Kutmon M, de Kok T, Arts I, Moerel M, Adriaens M.   +5 more
europepmc   +1 more source

Correlation of the differential expression of PIK3R1 and its spliced variant, p55α, in pan‐cancer

Molecular Oncology, EarlyView.
PIK3R1 undergoes alternative splicing to generate the isoforms, p85α and p55α. By combining large patient datasets with laboratory experiments, we show that PIK3R1 spliced variants shape cancer behavior. While tumors lose the protective p85α isoform, p55α is overexpressed, changes linked to poorer survival and more pronounced in African American ...
Ishita Gupta, Yang Song, Madeleine Ndahayo, Anirudh Saxena, Theresa Guo, Dylan Z. Kelley, Jessica Gore, Andrew Hennigan, Alexa Anderson, John C. Papadimitriou, Daria A. Gaykalova   +10 more
wiley   +1 more source

PDBe: enhanced structural data exploration to facilitate discovery. [PDF]

Nucleic Acids Res
Querino Lima Afonso M, Pidruchna I, Nair S, Midlik A, Lawal D, Vollmar M, Appasamy SD, Choudhary P, Kunnakkattu IR, Bertoni D, Escobar CA, Balasubramaniyan B, Gaborova R, Leines GD, Harrus D, Gupta D, Evans GL, Paramval U, Magana P, Tanweer A, Todor M, Thorpe CJ, Tsenkov M, Ganguly S, Ellaway J, Morellato Bueno W, Bellaiche A, Sehnal D, Svobodová R, Fleming JR, Velankar S.   +30 more
europepmc   +1 more source

RaMBat: Accurate identification of medulloblastoma subtypes from diverse data sources with severe batch effects

Molecular Oncology, EarlyView.
To integrate multiple transcriptomics data with severe batch effects for identifying MB subtypes, we developed a novel and accurate computational method named RaMBat, which leveraged subtype‐specific gene expression ranking information instead of absolute gene expression levels to address batch effects of diverse data sources.
Mengtao Sun, Jieqiong Wang, Shibiao Wan
wiley   +1 more source

Chromosome-level genome assembly and annotation of the predatory stink bug Eocanthecona furcellata. [PDF]

Sci Data
Guan DL, Qin YC, Zhang SH, Qin Y, Wei N, Xin L, Li XD.   +6 more
europepmc   +1 more source

Actin dynamics controlled by IqgC, a RasGAP at the crossroads between the IQGAP and fungal GAP1 families

FEBS Open Bio, EarlyView.
IqgC is a RasGAP from Dictyostelium discoideum. IqgC binds RasG via its RasGAP domain and deactivates it on macroendocytic cups, thereby suppressing the uptake of fluid and particles. IqgC has a positive effect on cell‐substratum adhesion, and its RGCt domain is required for recruitment to ventral foci.
Vedrana Filić, Darija Putar, Lucija Mijanović, Igor Weber   +3 more
wiley   +1 more source

OrthoML2GO: homology-based protein function prediction using orthogroups and machine learning. [PDF]

Vavilovskii Zhurnal Genet Selektsii
Malyugin EV, Afonnikov DA.
europepmc   +1 more source

Rethinking plastic waste: innovations in enzymatic breakdown of oil‐based polyesters and bioplastics

FEBS Open Bio, EarlyView.
Plastic pollution remains a critical environmental challenge, and current mechanical and chemical recycling methods are insufficient to achieve a fully circular economy. This review highlights recent breakthroughs in the enzymatic depolymerization of both oil‐derived polyesters and bioplastics, including high‐throughput protein engineering, de novo ...
Elena Rosini, Nicolò Antonelli, Gianluca Molla   +2 more
wiley   +1 more source

SMART v10: three decades of the protein domain annotation resource. [PDF]

Nucleic Acids Res
Letunic I, Bork P.
europepmc   +1 more source