Results 31 to 40 of about 79,573 (269)

A Review of Two Multiscale Methods for the Simulation of Macromolecular Assemblies: Multiscale Perturbation and Multiscale Factorization [PDF]

Computation, 2015
Many mesoscopic N-atom systems derive their structural and dynamical properties from processes coupled across multiple scales in space and time. That is, they simultaneously deform or display collective behaviors, while experiencing atomic scale vibrations and collisions. Due to the large number of atoms involved and the need to simulate over long time
Pankavich, Stephen, Ortoleva, Peter
openaire   +3 more sources

Publisher Correction: Rotating robots move collectively and self-organize

Nature Communications, 2018
The original version of this Article contained an error in Fig. 5. In Fig. 5e, the scale on the y-axis originally incorrectly went from ‘0’ to ‘1.10−4’. The correct scale goes from ‘0’ to ‘0.4’.
Christian Scholz, Michael Engel, Thorsten Pöschel   +2 more
doaj   +1 more source

Extracellular matrix remodeling through endocytosis and resurfacing of Tenascin-R

Nature Communications, 2021
Synapses are surrounded by an extracellular matrix (ECM) of extremely long-lived proteins that is thought to only be remodeled by proteolysis and de novo synthesis.
Tal M. Dankovich, Rahul Kaushik, Linda H. M. Olsthoorn, Gabriel Cassinelli Petersen, Philipp Emanuel Giro, Verena Kluever, Paola Agüi-Gonzalez, Katharina Grewe, Guobin Bao, Sabine Beuermann, Hannah Abdul Hadi, Jose Doeren, Simon Klöppner, Benjamin H. Cooper, Alexander Dityatev, Silvio O. Rizzoli   +15 more
doaj   +1 more source

Multiscale Cancer Modeling [PDF]

Annual Review of Biomedical Engineering, 2011
Simulating cancer behavior across multiple biological scales in space and time, i.e., multiscale cancer modeling, is increasingly being recognized as a powerful tool to refine hypotheses, focus experiments, and enable more accurate predictions. A growing number of examples illustrate the value of this approach in providing quantitative insights in the
Deisboeck, Thomas S., Wang, Zhihui, Macklin, Paul, Cristini, Vittorio   +3 more
openaire   +3 more sources

Multiscale Computing with the Multiscale Modeling Library and Runtime Environment

Procedia Computer Science, 2013
AbstractWe introduce a software tool to simulate multiscale models: the Multiscale Coupling Library and Environment 2 (MUSCLE 2). MUSCLE 2 is a component-based modeling tool inspired by the multiscale modeling and simulation framework, with an easy-to-use API which supports Java, C++, C, and Fortran.
Joris Borgdorff, Mariusz Mamonski, Bartosz Bosak, Derek Groen, Mohamed Ben Belgacem, Krzysztof Kurowski, Alfons G. Hoekstra   +6 more
openaire   +4 more sources

Multiscale brain modelling [PDF]

Philosophical Transactions of the Royal Society B: Biological Sciences, 2005
A central difficulty of brain modelling is to span the range of spatio-temporal scales from synapses to the whole brain. This paper overviews results from a recent model of the generation of brain electrical activity that incorporates both basic microscopic neurophysiology and large-scale brain anatomy to predict brain electrical activity at scales ...
P A, Robinson, C J, Rennie, D L, Rowe, S C, O'Connor, E, Gordon   +4 more
openaire   +2 more sources

The heterogeneous multiscale method [PDF]

Acta Numerica, 2012
The heterogeneous multiscale method (HMM), a general framework for designing multiscale algorithms, is reviewed. Emphasis is given to the error analysis that comes naturally with the framework. Examples of finite element and finite difference HMM are presented.
Assyr Abdulle, Weinan E, Björn Engquist, Eric Vanden-Eijnden   +3 more
openaire   +2 more sources

Do seconds make a difference? Investigating strain-specific behavior of yeast in dynamic glucose environments

Microbial Cell Factories
Background When applied for industrial-scale bioproduction, cells are subjected to ever-changing cultivation environments due to bioreactor heterogeneities, which can significantly influence their growth and production behavior. Cultivating and comparing
Luisa Blöbaum, Markus Bünker, Julian Schmitz   +2 more
doaj   +1 more source

Emerging experimental and computational methods for studying redox‐regulated structural transitions

FEBS Letters, EarlyView.
Redox reactions can reshape proteins and alter how they behave in cells, with important consequences for health and disease. This review explores emerging experimental and computational approaches for discovering these redox‐sensitive protein switches, revealing their structural effects, and predicting their behavior, opening new opportunities to ...
Tasneem Rass, Dana Reichmann, Gábor Erdős   +2 more
wiley   +1 more source

Fiber-reinforced origami electronics with high rigidity and flexibility for display applications

npj Flexible Electronics
Origami structures provide functional advantages to rigid electronics through geometric transformations. However, the transformations involved in folding and deployment cause stress concentration on flexure hinges of origami structure, triggering ...
Dohyeon Gong, Minji Kang, Suhyeon Hwang, Junggwang Jo, Insic Hong, Yeonwook Roh, Seungyong Han   +6 more
doaj   +1 more source