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Sequencing technologies — the next generation [PDF]

open access: yesNature Reviews Genetics, 2010
Demand has never been greater for revolutionary technologies that deliver fast, inexpensive and accurate genome information. This challenge has catalysed the development of next-generation sequencing (NGS) technologies. The inexpensive production of large volumes of sequence data is the primary advantage over conventional methods.
M. Metzker
semanticscholar   +4 more sources
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Next-generation DNA sequencing

Nature Biotechnology, 2008
DNA sequence represents a single format onto which a broad range of biological phenomena can be projected for high-throughput data collection. Over the past three years, massively parallel DNA sequencing platforms have become widely available, reducing the cost of DNA sequencing by over two orders of magnitude, and democratizing the field by putting ...
J. Shendure, Hanlee P. Ji
semanticscholar   +4 more sources

Next-Generation Sequencing

2016
Endometrial cancers are the most frequently diagnosed gynecological malignancy and were expected to be the seventh leading cause of cancer death among American women in 2015. The majority of endometrial cancers are of serous or endometrioid histology. Most human tumors, including endometrial tumors, are driven by the acquisition of pathogenic mutations
Daphne W. Bell   +2 more
openaire   +4 more sources

Benchmarking variant callers in next-generation and third-generation sequencing analysis

Briefings Bioinform., 2020
DNA variants represent an important source of genetic variations among individuals. Next- generation sequencing (NGS) is the most popular technology for genome-wide variant calling. Third-generation sequencing (TGS) has also recently been used in genetic
Surui Pei   +5 more
semanticscholar   +1 more source

Next-Generation Sequencing

Neuromuscular Disorders, 2019
Next-generation sequencing (NGS) is a powerful technology that allows for high-throughput multiplex sequencing. This chapter reviews the key steps in NGS wet lab and dry lab processing. The library preparation process prepares the substrates to be sequenced through nucleic acid isolation, fragmentation, isolation, end repair, adapter ligation, size ...
B. Udd   +5 more
openaire   +4 more sources

Next-generation sequencing in the clinic

Nature Biotechnology, 2013
Pools of cell lines carrying a variety of known mutations are used to validate the performance of a cancer diagnostic test based on next-generation sequencing.
Jason Y. Park   +2 more
openaire   +4 more sources

Next Generation Sequencing: Transcriptomics

2021
Fungal transcriptomics is a rising field which has gained attention in the last two decades. The recent democratization of high throughput next-generation sequencing (NGS) techniques for large-scale transcriptomic analysis provided the opportunity to explore transcriptomes at an unprecedented level of resolution.
Sillo, Fabiano
openaire   +1 more source

Next-Generation Sequencing in Cancer

Journal of Maxillofacial and Oral Surgery, 2020
In this article, we provide a gestalt idea about NGS technologies and their applications in cancer research and molecular diagnosis.Next-generation sequencing (NGS) advancements like DNA sequencing and RNA sequencing allow uncovering of genomic, transcriptomic, and epigenomic scenes of individual malignant growths.
S. Vinod Nair   +3 more
openaire   +3 more sources

cutPrimers: A New Tool for Accurate Cutting of Primers from Reads of Targeted Next Generation Sequencing

J. Comput. Biol., 2017
Cutting of primers from reads is an important step of processing targeted amplicon-based next generation sequencing data. Existing tools are adapted for cutting of one or several primer/adapter sequences from reads and removing all of their occurrences ...
A. Kechin   +3 more
semanticscholar   +1 more source

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