Results 1 to 10 of about 1,082 (160)

Development of an OpenMRS-OMOP ETL tool to support informatics research and collaboration in LMICs

Computer Methods and Programs in Biomedicine Update, 2023
Background: As more low and middle-income countries (LMICs) implement electronic health record systems (EHRs), informatics has become an important component of global health.
Juan Espinoza, Sab Sikder, Armine Lulejian, Barry Levine   +3 more
doaj   +2 more sources

Conversion of CPRD AURUM data into the OMOP common data model

Informatics in Medicine Unlocked, 2023
Introduction: Efforts to standardize clinical data using Common Data Models (CDMS) has grown in recent years. Use of CDMs allows for quicker understanding of data structure and reuse of existing tools.
Craig S. Mayer
doaj   +3 more sources

Harmonizing population health data into OMOP common data model: a demonstration using COVID-19 sero-surveillance data from Nairobi Urban Health and Demographic Surveillance System

Frontiers in Digital Health
BackgroundObservational health data are collected in different formats and structures, making it challenging to analyze with common tools. The Observational Medical Outcome Partnership (OMOP) Common Data Model (CDM) is a standardized data model that can ...
Michael Ochola, Sylvia Kiwuwa-Muyingo, Tathagata Bhattacharjee, David Amadi, Maureen Ng’etich, Damazo Kadengye, Henry Owoko, Boniface Igumba, Jay Greenfield, Jim Todd, Agnes Kiragga, Agnes Kiragga   +11 more
exaly   +3 more sources

Mapping Cancer Registry Data to the Episode Domain of the Observational Medical Outcomes Partnership Model (OMOP)

Applied Sciences (Switzerland), 2022
A great challenge in the use of standardized cancer registry data is deriving reliable, evidence-based results from large amounts of data. A solution could be its mapping to a common data model such as OMOP, which represents knowledge in a unified ...
Sylvia Nürnberg, Stefan Bartels, Jasmin Carus   +2 more
exaly   +3 more sources

Validation of the transformed clinical practice research datalink (CPRD) GOLD and aurum data into the OMOP common data model

Health Informatics Journal
Objective: To assesses the transformation of UK Clinical Practice Research Datalink (CPRD) databases into the Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) version 5.3.1.
George Kafatos
exaly   +2 more sources

Establishing standards: harmonising coding principles for a minimal cancer dataset in the OMOP Common Data Model

ESMO real world data and digital oncology
Background: Analysing clinical information across a network poses challenges due to heterogeneity of data collection, storage and availability. The Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) provides a standardised ...
A van Maanen
exaly   +3 more sources

Integrating longitudinal mental health data into a staging database: harnessing DDI-lifecycle and OMOP vocabularies within the INSPIRE Network Datahub

Frontiers in Big Data
BackgroundLongitudinal studies are essential for understanding the progression of mental health disorders over time, but combining data collected through different methods to assess conditions like depression, anxiety, and psychosis presents significant ...
David Amadi, Tathagata Bhattacharjee, Jay Greenfield   +2 more
exaly   +3 more sources

Advancing Toward a Common Data Model in Ophthalmology

Ophthalmology Science, 2023
Purpose: Evaluate the degree of concept coverage of the general eye examination in one widely used electronic health record (EHR) system using the Observational Health Data Sciences and Informatics Observational Medical Outcomes Partnership (OMOP) common
Cindy X. Cai, MD, MS, William Halfpenny, MB, BChir, MEng, Michael V. Boland, MD, PhD, Harold P. Lehmann, MD, PhD, Michelle Hribar, PhD, Kerry E. Goetz, MS, Sally L. Baxter, MD, MSc   +6 more
doaj   +1 more source

Building the observational medical outcomes partnership's T-MSIS Analytic File common data model

Informatics in Medicine Unlocked, 2023
Objectives: This effort used Databricks to create an Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) for Transformed MSIS Analytic File (TAF) Medicaid records.
Nick Williams
doaj   +1 more source

Incorporation of Korean Electronic Data Interchange Vocabulary into Observational Medical Outcomes Partnership Vocabulary [PDF]

Healthcare Informatics Research, 2021
Objectives We incorporated the Korean Electronic Data Interchange (EDI) vocabulary into Observational Medical Outcomes Partnership (OMOP) vocabulary using a semi-automated process.
Yeonchan Seong, Seng Chan You, Anna Ostropolets, Yeunsook Rho, Jimyung Park, Jaehyeong Cho, Dmitry Dymshyts, Christian G. Reich, Yunjung Heo, Rae Woong Park   +9 more
doaj   +1 more source