Results 21 to 30 of about 80,959 (317)
Identifying Variable-Length Palindromic Pairs in DNA Sequences [PDF]
The KIPS Transactions:PartB, 2007 The emphasis in genome projects has Been moving towards the sequence analysis in order to extract biological "meaning"(e.g., evolutionary history of particular molecules or their functions) from the sequence. Especially. palindromic or direct repeats that appear in a sequence have a biophysical meaning and the problem is to recognize interesting ...
Hyoung-Rae Kim +2 more
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BMC Genomics, 2023 Background Malvaceae is an economically important plant family of 4,225 species in nine subfamilies. Phylogenetic relationships among the nine subfamilies have always been controversial, especially for Brownlowioideae, whose phylogenetic position remains
Mingsong Wu +5 more
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Correction: Palindromic Sequence Artifacts Generated during Next Generation Sequencing Library Preparation from Historic and Ancient DNA [PDF]
PLoS ONE, 2014 doaj +4 more sources
Rare immune diseases paving the road for genome editing-based precision medicine
Frontiers in Genome Editing, 2023 Clustered regularly interspaced short palindromic repeats (CRISPR) genome editing platform heralds a new era of gene therapy. Innovative treatments for life-threatening monogenic diseases of the blood and immune system are transitioning from semi-random ...
Mara Pavel-Dinu +3 more
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Cutting sequences and palindromes [PDF]
, 2010 We give a unified geometric approach to some theorems about primitive elements and palindromes in free groups of rank 2. The geometric treatment gives new proofs of the theorems. Dedicated to Bill Harvey on his 65th birthday.
Gilman, Jane, Keen, Linda
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BioEssays, 2022 AbstractIn human languages, a palindrome reads the same forward as backward (e.g., ‘madam’). In regulatory DNA, a palindrome is an inverted sequence repeat that allows a transcription factor to bind as a homodimer or as a heterodimer with another type of transcription factor.
Rhea R. Datta, Jens Rister
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Palindromic Sequences of the Markov Spectrum [PDF]
Mathematical Notes, 2019 We study the periods of Markov sequences, which are derived from the continued fraction expression of elements in the Markov spectrum. This spectrum is the set of minimal values of indefinite binary quadratic forms that are specially normalised. We show that the periods of these sequences are palindromic after a number of circular shifts, the number of
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Nature Communications, 2016 The IgH3’ regulatory region contains an evolutionarily conserved palindromic sequence flanking important enhancer elements. Here the authors show that the palindrome is required for generating antibody diversity.
Alexis Saintamand +7 more
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Generalized Thue-Morse words and palindromic richness [PDF]
, 2011 We prove that the generalized Thue-Morse word $\mathbf{t}_{b,m}$ defined for $b \geq 2$ and $m \geq 1$ as $\mathbf{t}_{b,m} = (s_b(n) \mod m)_{n=0}^{+\infty}$, where $s_b(n)$ denotes the sum of digits in the base-$b$ representation of the integer $n ...
Starosta, Štěpán
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Palindromes in infinite ternary words [PDF]
, 2009 We study infinite words u over an alphabet A satisfying the property P : P(n)+ P(n+1) = 1+ #A for any n in N, where P(n) denotes the number of palindromic factors of length n occurring in the language of u.
Balkova, Lubomira +2 more
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