Results 21 to 30 of about 1,282 (176)

Meta-Pangenome: At the Crossroad of Pangenomics and Metagenomics [PDF]

open access: yes, 2020
AbstractWith the recent technological advancement in cultivation-independent high-throughput sequencing, metagenomes have tremendously improved our ability to characterize the genomic contents of the whole microbial communities. In this chapter, we argue the notion of pangenome can be applied beyond the available genome sequences by leveraging ...
Bing Ma, Michael France, Jacques Ravel
openaire   +1 more source

Nematophilic bacteria associated with entomopathogenic nematodes and drug development of their biomolecules

open access: yesFrontiers in Microbiology, 2022
The importance of Xenorhabdus and Photorhabdus symbionts to their respective Steinernema and Heterorhabditis nematode hosts is that they not only contribute to their entomopathogenicity but also to their fecundity through the production of small ...
Ryan Musumba Awori, Ryan Musumba Awori
doaj   +1 more source

Aldehyde Dehydrogenase Diversity in Azospirillum Genomes

open access: yesDiversity, 2023
Aldehyde dehydrogenases (ALDHs) are indispensable enzymes that play a pivotal role in mitigating aldehyde toxicity by converting them into less reactive compounds.
Ricardo Cuatlayotl-Olarte   +5 more
doaj   +1 more source

Molecular Mechanisms Underpinning Aggregation in Acidiphilium sp. C61 Isolated from Iron-Rich Pelagic Aggregates

open access: yesMicroorganisms, 2020
Iron-rich pelagic aggregates (iron snow) are hot spots for microbial interactions. Using iron snow isolates, we previously demonstrated that the iron-oxidizer Acidithrix sp. C25 triggers Acidiphilium sp.
Qianqian Li   +3 more
doaj   +1 more source

Antimicrobial Activity of Agastache Honey and Characterization of Its Bioactive Compounds in Comparison With Important Commercial Honeys

open access: yesFrontiers in Microbiology, 2019
There is an urgent need for new effective antimicrobial agents since acquired resistance of bacteria to currently available agents is increasing. The antimicrobial activity of Mono-floral Agastache honey produced from Australian grown Agastache rugosa ...
Sushil Anand   +5 more
doaj   +1 more source

Characterization of Physico-Chemical Properties and Antioxidant Capacities of Bioactive Honey Produced from Australian Grown Agastache rugosa and its Correlation with Colour and Poly-Phenol Content

open access: yesMolecules, 2018
The antioxidant and antimicrobial components of honey vary based on sourced of nectar. Medicinal plants with the therapeutic value have potential to produce honey with greater bioactivity.
Sushil Anand   +3 more
doaj   +1 more source

Towards plant pangenomics [PDF]

open access: yesPlant Biotechnology Journal, 2015
SummaryAs an increasing number of genome sequences become available for a wide range of species, there is a growing understanding that the genome of a single individual is insufficient to represent the gene diversity within a whole species. Many studies examine the sequence diversity within genes, and this allelic variation is an important source of ...
Golicz, Agnieszka A.   +2 more
openaire   +5 more sources

euka: Robust tetrapodic and arthropodic taxa detection from modern and ancient environmental DNA using pangenomic reference graphs

open access: yesMethods in Ecology and Evolution, 2023
Ancient environmental DNA (aeDNA) is a crucial source of information for past environmental reconstruction. However, the computational analysis of aeDNA involves the inherited challenges of ancient DNA (aDNA) and the typical difficulties of eDNA samples,
Nicola Alexandra Vogel   +7 more
doaj   +1 more source

Bacterial Microevolution and the Pangenome [PDF]

open access: yes, 2020
AbstractThe comparison of multiple genome sequences sampled from a bacterial population reveals considerable diversity in both the core and the accessory parts of the pangenome. This diversity can be analysed in terms of microevolutionary events that took place since the genomes shared a common ancestor, especially deletion, duplication, and ...
Lassalle, Florent, Didelot, Xavier
openaire   +2 more sources

Comparative Genomics Revealed a Potential Threat of Aeromonas rivipollensis G87 Strain and Its Antibiotic Resistance

open access: yesAntibiotics, 2023
Aeromonas rivipollensis is an emerging pathogen linked to a broad range of infections in humans. Due to the inability to accurately differentiate Aeromonas species using conventional techniques, in-depth comparative genomics analysis is imperative to ...
Esther Ubani K. Fono-Tamo   +3 more
doaj   +1 more source

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