Results 51 to 60 of about 573,153 (341)

Parallel Implementation of Density Functional Theory Methods in the Quantum Interaction Computational Kernel Program.

open access: yesJournal of Chemical Theory and Computation, 2020
We present the details of a GPU capable exchange correlation (XC) scheme integrated into the open source QUantum Interaction Computational Kernel (QUICK) program.
M. Manathunga   +4 more
semanticscholar   +1 more source

Peptide‐based ligand antagonists block a Vibrio cholerae adhesin

open access: yesFEBS Letters, EarlyView.
The structure of a peptide‐binding domain of the Vibrio cholerae adhesin FrhA was solved by X‐ray crystallography, revealing how the inhibitory peptide AGYTD binds tightly at its Ca2+‐coordinated pocket. Structure‐guided design incorporating D‐amino acids enhanced binding affinity, providing a foundation for developing anti‐adhesion therapeutics ...
Mingyu Wang   +9 more
wiley   +1 more source

Optimization Design Model of Functional Gradient Thermal Barrier Coating Material by Using Parallel Computation

open access: yesMATEC Web of Conferences, 2016
It is important for huge ship to find the ceramic/metal functional gradient thermal barrier coating materials. A parallel computation model is built for optimization design of three-dimensional ceramic/metal functionally gradient thermal barrier coating ...
Chen Zhao, Zhang Shesheng
doaj   +1 more source

Simple and Robust Boolean Operations for Triangulated Surfaces

open access: yesMathematics, 2023
Boolean operations on geometric models are important in numerical simulation and serve as essential tools in the fields of computer-aided design and computer graphics. The accuracy of these operations is heavily influenced by finite precision arithmetic,
Meijun Zhou   +3 more
doaj   +1 more source

Interplay between circadian and other transcription factors—Implications for cycling transcriptome reprogramming

open access: yesFEBS Letters, EarlyView.
This perspective highlights emerging insights into how the circadian transcription factor CLOCK:BMAL1 regulates chromatin architecture, cooperates with other transcription factors, and coordinates enhancer dynamics. We propose an updated framework for how circadian transcription factors operate within dynamic and multifactorial chromatin landscapes ...
Xinyu Y. Nie, Jerome S. Menet
wiley   +1 more source

First steps towards more numerical reproducibility*

open access: yesESAIM: Proceedings and Surveys, 2014
Questions whether numerical simulation is reproducible or not have been reported in several sensitive applications. Numerical reproducibility failure mainly comes from the finite precision of computer arithmetic.
Jézéquel Fabienne   +2 more
doaj   +1 more source

Integrating MPI-based numerical software into an advanced parallel computing environment [PDF]

open access: yesEleventh Euromicro Conference on Parallel, Distributed and Network-Based Processing, 2003. Proceedings., 2003
In this paper we present first experiences concerning the integration of MPI-based numerical software into an advanced programming environment for building parallel and distributed high-performance applications, which is under development in the context of Italian national research projects.
P. D’Ambra   +3 more
openaire   +3 more sources

Disordered but rhythmic—the role of intrinsic protein disorder in eukaryotic circadian timing

open access: yesFEBS Letters, EarlyView.
Unstructured domains known as intrinsically disordered regions (IDRs) are present in nearly every part of the eukaryotic core circadian oscillator. IDRs enable many diverse inter‐ and intramolecular interactions that support clock function. IDR conformations are highly tunable by post‐translational modifications and environmental conditions, which ...
Emery T. Usher, Jacqueline F. Pelham
wiley   +1 more source

A Computational Realization of a Semi-Lagrangian Method for Solving the Advection Equation

open access: yesJournal of Applied Mathematics, 2014
A parallel implementation of a method of the semi-Lagrangian type for the advection equation on a hybrid architecture computation system is discussed. The difference scheme with variable stencil is constructed on the base of an integral equality between ...
Alexander Efremov   +3 more
doaj   +1 more source

Home - About - Disclaimer - Privacy