Results 31 to 40 of about 44,017 (216)

DINA Model with Entropy Penalization

open access: yesMathematics, 2023
The cognitive diagnosis model (CDM) is an effective statistical tool for extracting the discrete attributes of individuals based on their responses to diagnostic tests.
Juntao Wang, Yuan Li
doaj   +1 more source

Volume penalization for inhomogeneous Neumann boundary conditions modeling scalar flux in complicated geometry

open access: yes, 2019
We develop a volume penalization method for inhomogeneous Neumann boundary conditions, generalizing the flux-based volume penalization method for homogeneous Neumann boundary condition proposed by Kadoch et al. [J. Comput. Phys. 231 (2012) 4365].
90836   +7 more
core   +3 more sources

Next‐generation proteomics improves lung cancer risk prediction

open access: yesMolecular Oncology, EarlyView.
This is one of very few studies that used prediagnostic blood samples from participants of two large population‐based cohorts. We identified, evaluated, and validated an innovative protein marker model that outperformed an established risk prediction model and criteria employed by low‐dose computed tomography in lung cancer screening trials.
Megha Bhardwaj   +4 more
wiley   +1 more source

Generalizing Gain Penalization for Feature Selection in Tree-Based Models

open access: yesIEEE Access, 2020
We develop a new approach for feature selection via gain penalization in tree-based models. First, we show that previous methods do not perform sufficient regularization and often exhibit sub-optimal out-of-sample performance, especially when correlated ...
Bruna Wundervald   +2 more
doaj   +1 more source

Tumor mutational burden as a determinant of metastatic dissemination patterns

open access: yesMolecular Oncology, EarlyView.
This study performed a comprehensive analysis of genomic data to elucidate whether metastasis in certain organs share genetic characteristics regardless of cancer type. No robust mutational patterns were identified across different metastatic locations and cancer types.
Eduardo Candeal   +4 more
wiley   +1 more source

Analysis of genome-wide association studies with multiple outcomes using penalization. [PDF]

open access: yesPLoS ONE, 2012
Genome-wide association studies have been extensively conducted, searching for markers for biologically meaningful outcomes and phenotypes. Penalization methods have been adopted in the analysis of the joint effects of a large number of SNPs (single ...
Jin Liu, Jian Huang, Shuangge Ma
doaj   +1 more source

Microscopic Model of Intermediate Phase in Flexible to Rigid Transition

open access: yesFrontiers in Physics, 2021
We introduce a lattice gas model with a modified Hamiltonian considering different energy for cycles of connected atoms. The system can be interpreted as a chalcogenide glass with pollutants forming floppy and rigid structures.
Aldo Sayeg Pasos-Trejo   +1 more
doaj   +1 more source

RaMBat: Accurate identification of medulloblastoma subtypes from diverse data sources with severe batch effects

open access: yesMolecular Oncology, EarlyView.
To integrate multiple transcriptomics data with severe batch effects for identifying MB subtypes, we developed a novel and accurate computational method named RaMBat, which leveraged subtype‐specific gene expression ranking information instead of absolute gene expression levels to address batch effects of diverse data sources.
Mengtao Sun, Jieqiong Wang, Shibiao Wan
wiley   +1 more source

Galilean-Invariant Characteristic-Based Volume Penalization Method for Supersonic Flows with Moving Boundaries

open access: yesFluids, 2021
This work extends the characteristic-based volume penalization method, originally developed and demonstrated for compressible subsonic viscous flows in (J. Comput. Phys.
Nurlybek Kasimov   +3 more
doaj   +1 more source

Exon 7 splicing of ERα predicts poor prognosis and increases phenotypic heterogeneity in luminal a subtype breast cancer

open access: yesFEBS Open Bio, EarlyView.
ERα splice variant ERα∆7 lacks the C‐terminus, and its expression may change phenotypes of breast cancers. Our results showed that ERα∆7 is found in the luminal A subtype, and elevated ERα∆7 levels are linked to improved cell survival with lower proliferation and migration.
Long Wai Tsui   +10 more
wiley   +1 more source

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