Results 31 to 40 of about 810,703 (302)

Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions [PDF]

, 2012
Dörr D, Gronau I, Moran S, Yavneh I. Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions. Algorithms for Molecular Biology.
Gronau, Ilan, Ilan Gronau, Irad Yavneh, Daniel Doerr, Yavneh, Irad, Moran, Shlomo, Doerr Daniel, Gronau Ilan, Moran Shlomo, Yavneh Irad, Shlomo Moran, Dörr, Daniel ; https://orcid.org/   +11 more
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Phylogenetic Factor Analysis [PDF]

Systematic Biology, 2017
51 pages (42 main, 9 supplemental), 9 figures (5 main, 4 supplemental), 4 tables (2 main, 2 supplemental), submitted to Systematic ...
Tolkoff, Max R., Alfaro, Michael E., Baele, Guy, Lemey, Philippe, Suchard, Marc A.   +4 more
openaire   +5 more sources

Phylogenetic context using phylogenetic outlines [PDF]

, 2021
A bstract Microbial studies typically involve the sequencing and assembly of draft genomes for individual microbes or whole microbiomes. Given a draft genome, one first task is to determine its phylogenetic context, that is, to place it relative to the set of related reference ...
Caner Bagci, David Bryant, Banu Cetinkaya, Daniel H. Huson   +3 more
openaire   +1 more source

Phylogeography of the Plateau Pika (Ochotona curzoniae) in Response to the Uplift of the Qinghai-Tibet Plateau

Diversity, 2023
The evolution and current distribution of species on the Qinghai-Tibet Plateau have been significantly impacted by historical occurrences, including the uplift of the plateau and the Quaternary climate upheaval.
Yinglian Qi, Xiaoyan Pu, Zhilian Li, Daoguang Song, Zhi Chen   +4 more
doaj   +1 more source

The Mitochondrial Genome of the Phytopathogenic Fungus Bipolaris sorokiniana and the Utility of Mitochondrial Genome to Infer Phylogeny of Dothideomycetes

Frontiers in Microbiology, 2020
A number of species in Bipolaris are important plant pathogens. Due to a limited number of synapomorphic characters, it is difficult to perform species identification and to estimate phylogeny of Bipolaris based solely on morphology.
Nan Song, Yuehua Geng, Xinghao Li
doaj   +1 more source

Virome of high-altitude canine digestive tract and genetic characterization of novel viruses potentially threatening human health

mSphere, 2023
The majority of currently emerging infectious illnesses are zoonotic infections, which have caused serious public health and economic implications. The development of viral metagenomics has helped us to explore unknown viruses.
Xiaojie Jiang, Jia Liu, Yuan Xi, Qing Zhang, Yongshun Wang, Min Zhao, Xiang Lu, Haisheng Wu, Tongling Shan, Bin Ni, Wen Zhang, Xiao Ma   +11 more
doaj   +1 more source

BOOL-AN: A method for comparative sequence analysis and phylogenetic reconstruction [PDF]

, 2009
A novel discrete mathematical approach is proposed as an additional tool for molecular systematics which does not require prior statistical assumptions concerning the evolutionary process.
Ittzés, Péter, Jakó, Éena, Horváth, Arnold, Podani, János, Ari, Eszter   +4 more
core   +1 more source

Presence and diversity of Leishmania RNA virus in an old zoonotic cutaneous leishmaniasis focus, northeastern Iran: haplotype and phylogenetic based approach

International Journal of Infectious Diseases, 2020
Objective: Leishmania RNA virus (LRV) is a double-stranded RNA (dsRNA) virus that circulates within many species of the Leishmania parasite. In this study, we aimed to investigate the presence of LRV2 circulating in Leishmania isolates in an old focus of
Reza Saberi, Mahdi Fakhar, Homa Hajjaran, Angila Ataei-Pirkooh, Mehdi Mohebali, Niloofar Taghipour, Hajar Ziaei Hezarjaribi, Yousef Moghadam, Abouzar Bagheri   +8 more
doaj   +1 more source

Improved Understanding of the Macrofungal Diversity of Mongolia: Species Richness, Conservation Status, and An Annotated Checklist

Mycobiology
In this study, we updated and revised the checklist of macrofungi, along with the distribution of phytogeographical regions and the regional conservation status in Mongolia.
Nyamsuren Kherlenchimeg, Ganbaatar Burenbaatar, Shukherdorj Baasanmunkh, Zagarjav Tsegmed, Magsar Urgamal, Tolgor Bau, Sang-Kuk Han, Seung-Yoon Oh, Hyeok Jae Choi   +8 more
doaj   +1 more source

Phylogenetic support values are not necessarily informative : the case of the Serialia hypothesis (a mollusk phylogeny) [PDF]

, 2009
Background: Molecular phylogenies are being published increasingly and many biologists rely on the most recent topologies. However, different phylogenetic trees often contain conflicting results and contradict significant background data. Not knowing how
Annette Klussmann-Kolb, Christoph Mayer, Wägele, Johann Wolfgang, Klussmann-Kolb Annette, Heike Wägele, Mayer, Christoph, Wägele, Heike, Wägele J Wolfgang, Letsch, Harald, Mayer Christoph, Klussmann-Kolb, Annette, Misof Bernhard, Wägele Heike, Bernhard Misof, J Wolfgang Wägele, Harald Letsch, Misof, Bernhard, Letsch Harald   +17 more
core   +1 more source