Results 31 to 40 of about 835,855 (305)

The Mitochondrial Genome of the Phytopathogenic Fungus Bipolaris sorokiniana and the Utility of Mitochondrial Genome to Infer Phylogeny of Dothideomycetes

Frontiers in Microbiology, 2020
A number of species in Bipolaris are important plant pathogens. Due to a limited number of synapomorphic characters, it is difficult to perform species identification and to estimate phylogeny of Bipolaris based solely on morphology.
Nan Song, Yuehua Geng, Xinghao Li
doaj   +1 more source

Virome of high-altitude canine digestive tract and genetic characterization of novel viruses potentially threatening human health

mSphere, 2023
The majority of currently emerging infectious illnesses are zoonotic infections, which have caused serious public health and economic implications. The development of viral metagenomics has helped us to explore unknown viruses.
Xiaojie Jiang, Jia Liu, Yuan Xi, Qing Zhang, Yongshun Wang, Min Zhao, Xiang Lu, Haisheng Wu, Tongling Shan, Bin Ni, Wen Zhang, Xiao Ma   +11 more
doaj   +1 more source

The role of edaphic environment and climate in structuring phylogenetic pattern in seasonally dry tropical plant communities [PDF]

, 2015
This study was made possible through the kind financial support of the São Paulo Research Foundation - http://fapesp.br/en (Fundação de Amparo à Pesquisa do Estado de São Paulo - Fapesp 2013/15280-9).Seasonally dry tropical plant formations (SDTF) are ...
Marcelo Freire Moro, Fernando Roberto Martins (709387), Freire Moro, M., Martins, Fernando Roberto, Fernando Roberto Martins, NIc Lughadha, Eimear, Soares de Araújo, F., Marcelo Freire Moro (5662525), Moro, Marcelo Freire, Thomas R Meagher, Aurélio Silva, I., Roberto Martins, F., Meagher, T. R., Silva, Igor Aurélio, Francisca Soares de Araújo (627635), Nic Lughadha, E. M., Araújo, Francisca Soares de, Francisca Soares de Araújo, Eimear Nic Lughadha, Thomas R. Meagher (420346), Meagher, Thomas Robert, Igor Aurélio Silva, Eimear Nic Lughadha (709386), Igor Aurélio Silva (709385), Moro Marcelo Freire, Silva Igor Aurélio, Meagher Thomas R., Nic Lughadha Eimear, Francisca Soares; Lughadha, Lughadha, Eimear Nic, Marcelo Freire; Silva, Eimear Nic; Meagher, Fernando Roberto, Moro, Meagher, Thomas R, de Araújo Francisca Soares, Meagher, Thomas R., Martins Fernando Roberto, Thomas R.; Martins, Igor Aurelio; de Araujo   +39 more
core   +1 more source

Distinguishing Phylogenetic Networks [PDF]

SIAM Journal on Applied Algebra and Geometry, 2018
Phylogenetic networks are becoming increasingly popular in phylogenetics since they have the ability to describe a wider range of evolutionary events than their tree counterparts. In this paper, we study Markov models on phylogenetic networks and their associated geometry.
Elizabeth Gross, Colby Long
openaire   +3 more sources

Phylogenetic context using phylogenetic outlines [PDF]

, 2021
A bstract Microbial studies typically involve the sequencing and assembly of draft genomes for individual microbes or whole microbiomes. Given a draft genome, one first task is to determine its phylogenetic context, that is, to place it relative to the set of related reference ...
Caner Bagci, David Bryant, Banu Cetinkaya, Daniel H. Huson   +3 more
openaire   +1 more source

Presence and diversity of Leishmania RNA virus in an old zoonotic cutaneous leishmaniasis focus, northeastern Iran: haplotype and phylogenetic based approach

International Journal of Infectious Diseases, 2020
Objective: Leishmania RNA virus (LRV) is a double-stranded RNA (dsRNA) virus that circulates within many species of the Leishmania parasite. In this study, we aimed to investigate the presence of LRV2 circulating in Leishmania isolates in an old focus of
Reza Saberi, Mahdi Fakhar, Homa Hajjaran, Angila Ataei-Pirkooh, Mehdi Mohebali, Niloofar Taghipour, Hajar Ziaei Hezarjaribi, Yousef Moghadam, Abouzar Bagheri   +8 more
doaj   +1 more source

Letter: TreeAdder: a tool to assist the optimal positioning of a new leaf into an existing phylogenetic tree [PDF]

, 2007
TreeAdder is a computer application that adds a leaf in all possible positions on a phylogenetic tree. The resulting set of trees represent a dataset appropriate for maximum likelihood calculation of the optimal tree.
Gatherer, Derek
core   +1 more source

Phylogenetic relationships in the family Alloherpesviridae [PDF]

, 2009
Phylogenetic relationships among herpesviruses (HVs) of mammals, birds, and reptiles have been studied extensively, whereas those among other HVs are relatively unexplored.
Kelley, G.O., Kurobe, T., Alfaro, M.E., Davison, A.J., Hedrick, R.P., Waltzek, T.B.   +5 more
core   +1 more source

Tangent Phylogenetic PCA

, 2023
Phylogenetic PCA (p-PCA) is a version of PCA for observations that are leaf nodes of a phylogenetic tree. P-PCA accounts for the fact that such observations are not independent, due to shared evolutionary history. The method works on Euclidean data, but in evolutionary biology there is a need for applying it to data on manifolds, particularly shapes ...
Morten Akhøj, Xavier Pennec, Stefan Sommer   +2 more
openaire   +4 more sources

Improved Understanding of the Macrofungal Diversity of Mongolia: Species Richness, Conservation Status, and An Annotated Checklist

Mycobiology
In this study, we updated and revised the checklist of macrofungi, along with the distribution of phytogeographical regions and the regional conservation status in Mongolia.
Nyamsuren Kherlenchimeg, Ganbaatar Burenbaatar, Shukherdorj Baasanmunkh, Zagarjav Tsegmed, Magsar Urgamal, Tolgor Bau, Sang-Kuk Han, Seung-Yoon Oh, Hyeok Jae Choi   +8 more
doaj   +1 more source