Results 31 to 40 of about 594,871 (338)
Clann: investigating phylogenetic information through supertree analyses [PDF]
Bioinformatics, 2004 Abstract Summary: Clann has been developed in order to provide methods of investigating phylogenetic information through the application of supertrees. Availability: Clann has been precompiled for Linux, Apple Macintosh and Windows operating systems and is available from http://bioinf.may.ie/software/clann.
Creevey, C.J., McInerney, J.O.
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An automated convergence diagnostic for phylogenetic MCMC analyses
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2023 AbstractAssessing convergence of Markov chain Monte Carlo (MCMC) based analyses is crucial but challenging, especially so in high dimensional and complex spaces such as the space of phylogenetic trees (treespace). In practice, it is assumed that the target distribution is the unique stationary distribution of the MCMC and convergence is achieved when ...
Lars Berling +2 more
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Characterization of the complete plastid genome of Lysimachia christinae Hance (Primulaceae)
Mitochondrial DNA. Part B. Resources, 2021 Lysimachia christinae Hance is widely distributed in subtropical China at the elevational range from 500–2300 m. The species is an important medicinal herb for treating jaundice, urinary disorders, and the liver.
Cai-Yun Zhang +2 more
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Molecular and Biological Characterization of a Cryptosporidium molnari-Like Isolate from a Guppy (Poecilia reticulata) [PDF]
, 2004 Histological, morphological, genetic, and phylogenetic analyses of a Cryptosporidium molnari-like isolate from a guppy (Poecilia reticulata) identified stages consistent with those of C. molnari and revealed that C.
Ryan, U., O'Hara, A.J., Xiao, L.
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Phylogenetic analyses of Chaetopteridae (Annelida)
Zoologica Scripta, 2017 Phylogenetic relationships within Chaetopteridae were assessed using parsimony cladistic analysis of 43 external morphological characters and molecular phylogenetic analysis of three genes: mitochondrial cytochrome oxidase subunit I DNA (COI) and nuclear 28S and 18S ribosomal DNA. The group currently comprises four accepted genera: Chaetopterus Cuvier,
Jenna M. Moore +2 more
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The Plant Pathology Journal, 2013 The full-genome sequences of fourteen isolates of Broad bean wilt virus 2 (BBWV2), collected from broad bean, pea, spinach, bell pepper and paprika plants in Korea during the years 2006–2012, were determined and analyzed comparatively along with fifteen ...
Hae-Ryun Kwak +7 more
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Phylogenetic trait‐based analyses of ecological networks [PDF]
Ecology, 2013 Ecological networks of two interacting guilds of species, such as flowering plants and pollinators, are common in nature, and studying their structure can yield insights into their resilience to environmental disturbances. Here we develop analytical methods for exploring the strengths of interactions within bipartite networks consisting of two guilds ...
Rafferty, Nicole E, Ives, Anthony R
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The complete mitochondrial genome of the Zhijiang duck and its phylogenetic analyses
Mitochondrial DNA. Part B. Resources, 2019 Zhijiang duck (ZJ) is one of the famous indigenous breed of Hunan province in China. The complete mitochondrial genome sequence plays an important role in the accurate determination of phylogenetic relationships among metazoans. It is the first time that
Si-Min Peng +4 more
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Comparative Analyses of Phenotypic Sequences Using Phylogenetic Trees [PDF]
The American Naturalist, 2019 AbstractPhenotypic sequences are a type of multivariate trait organized structurally, such as teeth distributed along the dental arch, or temporally, such as the stages of an ontogenetic series. However, unlike other multivariate traits, the elements of a phenotypic sequence are arranged along a vector, which allows for distinct evolutionary patterns ...
Caetano, Daniel S., Beaulieu, Jeremy M.
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The complete mitochondrial genomes of the nematode-trapping fungus Arthrobotrys musiformis
Mitochondrial DNA. Part B. Resources, 2019 We describe the complete mitochondrial genome of the nematode-trapping fungus Arthrobotrys musiformis. In this study, the complete mitochondrial genome of A. musiformis was sequenced. This mitogenome is a circular molecule of 179,060 bp in length.
Yue-Qi Zhang, Ze-Fen Yu
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