Results 71 to 80 of about 330 (99)

Associative conditioning in gene regulatory network models increases integrative causal emergence. [PDF]

Commun Biol
Pigozzi F, Goldstein A, Levin M.
europepmc   +1 more source

Recombinations, chains and caps: resolving problems with the DCJ-indel model. [PDF]

Algorithms Mol Biol
Bohnenkämper L.
europepmc   +1 more source

Hyperdimensional computing: A fast, robust, and interpretable paradigm for biological data. [PDF]

PLoS Comput Biol
Stock M, Van Criekinge W, Boeckaerts D, Taelman S, Van Haeverbeke M, Dewulf P, De Baets B.   +6 more
europepmc   +1 more source

Basic Phylogenetic Combinatorics

2011
Phylogenetic combinatorics is a branch of discrete applied mathematics concerned with the combinatorial description and analysis of phylogenetic trees and related mathematical structures such as phylogenetic networks and tight spans. Based on a natural conceptual framework, the book focuses on the interrelationship between the principal options for ...
Dress, A, Huber, Katharina, Koolen, J, Moulton, Vincent, Spillner, A   +4 more
openaire   +1 more source

RECENT PROGRESS IN PHYLOGENETIC COMBINATORICS

Proceedings of the 6th Asia-Pacific Bioinformatics Conference, 2007
of D is an R-tree. (ii) There exists a tree (V,E) whose vertex set V contains X, and an edge weighting ` : E → R that assigns a positive length `(e) to each edge e in E, such that D is the restriction of X to the shortest-path metric induced on V. (iii) There exists a map w : S(X) → R≥0 from the set S(X) of all bi-partitions or splits of X into the set
openaire   +1 more source

Phylogenetic Diversity: From Combinatorics to Ecology

2007
Abstract Phylogenetic diversity (PD) is a measure of the evolutionary history spanned by a set of taxa within a larger phylogenetic tree. Briefly, the PD score of a subset of taxa, S, is the sum of the lengths of those edges of the tree that span S (a more precise definition follows later).
Klaas Hartmann, Mike Steel
openaire   +1 more source

Combinatorics of normal and hybrid phylogenetic networks.

A phylogenetic tree has been a classical tool for biologists to represent and study evolutionary relationships among species. However, many complex patterns in genetic data extend beyond the scope of simple tree diagrams and require a more advanced methodology. Rooted phylogenetic networks allow for hybridization events, and allow biologists to present
openaire   +1 more source

Liquid Metal Combinatorics toward Materials Discovery

Advanced Materials, 2023
Wei Rao
exaly  

Abelian combinatorics on words: A survey

Computer Science Review, 2023
Gabriele Fici
exaly  

Symmetry, Combinatorics, Artificial Intelligence, Music and Spectroscopy

Symmetry, 2021
Krishnan Balasubramanian
exaly