Results 181 to 190 of about 1,097,195 (292)

treestructure: an R package to detect population structure in phylogenetic trees. [PDF]

Bioinformatics
Nascimento FF, Franceschi VB, Volz EM.
europepmc   +1 more source

Turning a new leaf: PhenoVision provides leaf phenology data at the global scale

Applications in Plant Sciences, EarlyView.
Abstract Premise Plant phenology dictates many aspects of community function and ecosystem dynamics. Yet, global phenology data are still limited, especially in areas lacking monitoring programs. Here we present a new data resource, PhenoVision–Leaf, which extends a computer vision pipeline utilizing iNaturalist digital image vouchers to produce global‐
Erin L. Grady, Ellen G. Denny, Carrie E. Seltzer, John Deck, Daijiang Li, Russell Dinnage, Robert P. Guralnick   +6 more
wiley   +1 more source

Vector Encoding of Phylogenetic Trees by Ordered Leaf Attachment. [PDF]

Bull Math Biol
Richman DH, Zhang C, Matsen FA.
europepmc   +1 more source

Molecular methods for differentiating Phragmites australis subspecies and identification of hybrid stands in the Upper Midwestern United States

Applications in Plant Sciences, EarlyView.
Abstract Premise In North America, Phragmites australis (common reed) has drawn a great deal of research attention. Non‐native P. australis subsp. australis is a noxious weed that has locally displaced native P. australis subsp. americanus in some areas.
Nicholas P. Tippery, Daniel J. Larkin, Julia Bohnen, Douglas L. Wendell, Neil O. Anderson, Susan M. Galatowitsch, Marie Abbey, Alan G. Smith, Andrzej K. Noyszewski   +8 more
wiley   +1 more source

General-purpose topology-aware embedding of tumor phylogenetic trees with graph neural networks. [PDF]

Bioinform Adv
Bresolin P, Vandin F.
europepmc   +1 more source

Tree Visualization By One Table (tvBOT): a web application for visualizing, modifying and annotating phylogenetic trees. [PDF]

Nucleic Acids Res, 2023
Xie J, Chen Y, Cai G, Cai R, Hu Z, Wang H.   +5 more
europepmc   +1 more source

BarnebyLives: An R package to create herbarium specimen labels and clean spreadsheets

Applications in Plant Sciences, EarlyView.
Abstract Premise Accessioning herbarium specimens is labor intensive, yet remains vital for research in ecology, evolution, and conservation. As institutional support for herbaria declines, efficient tools are needed to streamline this process. The R package BarnebyLives was developed to assist collectors by supplementing collection notes, verifying ...
Reed Clark Benkendorf, Jeremie B. Fant
wiley   +1 more source

Dissecting discordance of mitochondrial and nuclear phylogenetic trees in insects. [PDF]

Crop Health
Mi X, Ou GZ, Zhu Y, Shen XX.
europepmc   +1 more source

Herbarium‐based measurements are reliable predictors of fresh plant traits in Neotropical Myrtaceae

Applications in Plant Sciences, EarlyView.
Abstract Premise Herbarium specimens are increasingly used to extract morphological traits for ecological and evolutionary studies, yet the effects of tissue desiccation on trait measurements remain poorly understood. Here, we tested two hypotheses: (H1) whether higher tissue water content leads to greater measurement changes after herborization and ...
Yacov Kilsztajn, Lázaro Henrique Soares Moraes de Conceição, Thais Vasconcelos, Carolyn Elinore Barnes Proença, Vanessa Graziele Staggemeier   +4 more
wiley   +1 more source

PhyloFusion-Fast and Easy Fusion of Rooted Phylogenetic Trees into Rooted Phylogenetic Networks. [PDF]

Syst Biol
Zhang L, Cetinkaya B, Huson DH.
europepmc   +1 more source