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Phylogeny.fr: robust phylogenetic analysis for the non-specialist
Nucleic Acids Res., 2008 Phylogenetic analyses are central to many research areas in biology and typically involve the identification of homologous sequences, their multiple alignment, the phylogenetic reconstruction and the graphical representation of the inferred tree.
Alexis Dereeper +11 more
semanticscholar +1 more source
Parasites & Vectors, 2019 Background Our study aimed to assess the diversity of the species of Anaplasmataceae in Senegal that infect animals and ticks in three areas: near Keur Momar Sarr (northern region), Dielmo and Diop (Sine Saloum, central region of Senegal), and in ...
Mustapha Dahmani +8 more
doaj +1 more source
2011 German Escherichia coli outbreak: Alignment-free whole-genome phylogeny by feature frequency profiles [PDF]
, 2011 Accuracy of SNP-based whole-genome phylogeny reconstruction relies heavily on quality of sequence alignment which is particularly hindered by poorly assembled genomes. Alignment-free methods might provide additional insights. Here, we constructed a whole-
Hoi Shan Kwan +3 more
core +2 more sources
The phylogeny of Apterygota and on phylogeny in general [PDF]
Bolletino di zoologia, 1980 Abstract From a critical reading of S. M. Manton's “The Arthropoda” (1977) and D.T. Anderson's “Embryology and phylogeny in Annelids and Arthropods” (1973) it is shown that the “functional morphology” of these authors used in phylogenetical sense is old fashioned “Lamarckism” and thus unsuited for phylogenetical considerations.
openaire +2 more sources
BMC Genomics, 2018 Background Deep-sea hydrothermal vents are unique chemoautotrophic ecosystems with harsh conditions. Alvinocaris longirostris is one of the dominant crustacean species inhabiting in these extreme environments.
Min Hui, Jiao Cheng, Zhongli Sha
doaj +1 more source
BMC Genomics, 2019 Background Hydrothermal vents and cold seeps are typical deep-sea chemosynthetically-driven ecosystems that allow high abundance of specialized macro-benthos.
Jiao Cheng, Min Hui, Zhongli Sha
doaj +1 more source
Unraveling the rapid radiation of crested newts, Triturus cristatus superspecies, using complete mitogenomic sequences [PDF]
, 2011 Background - The rapid radiation of crested newts (Triturus cristatus superspecies) comprises four morphotypes: 1) the T. karelinii group, 2) T. carnifex - T. macedonicus, 3) T. cristatus and 4) T. dobrogicus.
Arntzen, J.W., Wielstra, B.M.
core +6 more sources
Current Opinion in Genetics & Development, 1991 The avalanche of molecular sequence data from a wide variety of organisms and genes makes the construction and testing of evolutionary trees a widespread and demanding activity. We present the most recent advances in the interpretation of molecular data, as well as recent phylogenetic results affecting both molecular evolutionary biology and other ...
Sidow, Arend, Bowman, Barbara H
openaire +2 more sources
Phylogeny of Miliusa (Magnoliales: Annonaceae: Malmeoideae: Miliuseae), with descriptions of two new species from Malesia [PDF]
, 2013 The molecular phylogeny of Miliusa (Annonaceae) is reconstructed, with 27 (of ca. 50) species included, using a combination of seven plastid markers (rbcL exon, trnL intron, trnL-F spacer, matK exon, ndhF exon, psbA-trnH spacer, and ycf1 exon ...
Chaowasku, Tanawat, Keßler, Paul J. A.
core +2 more sources
Chromosomes and phylogeny in Crepis, [PDF]
, 1930 P6 ...
Babcock, E. B. (Ernest Brown), 1877-1954 +1 more
core +2 more sources