Results 21 to 30 of about 2,120 (141)

Comparative phylogenetic analyses of members of the order Planctomycetales and the division Verrucomicrobia: 23S rRNA gene sequence analysis supports the 16S rRNA gene sequence-derived phylogeny. [PDF]

International Journal of Systematic and Evolutionary Microbiology, 2000
Almost complete 23S rRNA gene sequences were obtained from 13 planctomycete strains, the fimbriated, prosthecate bacterium Verrucomicrobium spinosum and two strains of the genus Prosthecobacter. The 23S rRNA genes were amplified by the PCR, using modified primers.
Ward, Naomi L., Rainey, Fred A., Hedlund, Brian P., Staley, James T., Ludwig, Wolfgang, Stackebrandt, Erko   +5 more
openaire   +3 more sources

A metabarcoding analysis of the wrackbed microbiome indicates a phylogeographic break along the North Sea–Baltic Sea transition zone

Environmental Microbiology, Volume 25, Issue 9, Page 1659-1673, September 2023., 2023
Abstract Sandy beaches are biogeochemical hotspots that bridge marine and terrestrial ecosystems via the transfer of organic matter, such as seaweed (termed wrack). A keystone of this unique ecosystem is the microbial community, which helps to degrade wrack and re‐mineralize nutrients. However, little is known about this community.
Emma L. Berdan, Fabian Roger, Maren Wellenreuther, Alexandra Kinnby, Gunnar Cervin, Ricardo Pereyra, Mats Töpel, Kerstin Johannesson, Roger K. Butlin, Carl André   +9 more
wiley   +1 more source

Molecular and Ultrastructural Confirmation of Classification of ATCC 35122 as a Strain of Pirellula staleyi [PDF]

, 2002
A freshwater isolate from Campus Lake, Baton Rouge, LA, USA, strain ATCC 35122 (= ICPB 4362 = Schmidt CLPM White = Tekniepe BT2 white), which had been proposed as a putative reference strain for 'Planctomyces staleyi' (later reclassified as Pirellula ...
Butler, Margaret K., Fuerst, John A., Wang, Jenny, Webb, Richard I.   +3 more
core   +1 more source

Metabolic network analysis reveals microbial community interactions in anammox granules. [PDF]

, 2017
Microbial communities mediating anaerobic ammonium oxidation (anammox) represent one of the most energy-efficient environmental biotechnologies for nitrogen removal from wastewater.
Bhattacharjee, Ananda S, Goel, Ramesh, Hamilton, Joshua J, Lawson, Christopher E, McMahon, Katherine D, Noguera, Daniel R, Wu, Sha   +6 more
core   +2 more sources

Taxonomic heterogeneity within the Planctomycetales as derived by DNA–DNA hybridization, description of Rhodopirellula baltica gen. nov., sp. nov., transfer of Pirellula marina to the genus Blastopirellula gen. nov. as Blastopirellula marina comb. nov. and emended description of the genus Pirellula [PDF]

International Journal of Systematic and Evolutionary Microbiology, 2004
Ninety-seven strains of budding bacteria originating from various aquatic habitats and morphologically resembling planctomycetes were investigated taxonomically. Taxonomic differentiation was based on DNA–DNA hybridization, physiological properties and chemotaxonomic tests.
Schlesner, H., Rensmann, C., Tindall, B., Gade, D., Rabus, R., Pfeiffer, S., Hirsch, P.   +6 more
openaire   +3 more sources

Comparative Analysis of Ribonuclease P RNA of the Planctomycetes [PDF]

, 2004
The planctomycetes, order Planctomycetales, are a distinct phylum of domain Bacteria. Genes encoding the RNA portion of ribonuclease P (RNase P) of some planctomycete members were sequenced and compared with existing database planctomycete sequences ...
Altman, Altman, Brochier, Brown, Brown, Brown, Butler, Christian, Condon, Derakshani, Deutscher, Di Giulio, Embley, Felsenstein, Frank, Franzmann, Fuerst, Fuerst, Garrity, Giovannoni, Glöckner, Green, Guerrier-Takada, Haas, Haas, Haas, Hancock, Harris, Harris, Herrmann, Hugenholtz, Jeffares, John A. Fuerst, Kirsebom, Kuypers, Liesack, Liesack, Lindsay, Lindsay, Maeda, Margaret K. Butler, Massire, Massire, Nicholas, Oh, Pace, Pitulle, Schlesner, Schlesner, Schlesner, Schmid, Schön, Sinninghe Damsté, Strous, Vergin, Vioque, Walter, Wang, Woese, Yoon, Zahler, Zuker   +61 more
core   +1 more source

Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae [PDF]

Standards in Genomic Sciences, 2014
Planctomyces brasiliensis Schlesner 1990 belongs to the order Planctomycetales, which differs from other bacterial taxa by several distinctive features such as internal cell compartmentalization, multiplication by forming buds directly from the spherical, ovoid or pear-shaped mother cell and a cell wall consisting of a proteinaceous layer rather than a
Scheuner, Carmen, Tindall, Brian J, Lu, Megan, Nolan, Matt, Lapidus, Alla, Cheng, Jan-Fang, Goodwin, Lynne, Pitluck, Sam, Huntemann, Marcel, Liolios, Konstantinos, Pagani, Ioanna, Mavromatis, Konstantinos, Ivanova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Jeffries, Cynthia D, Hauser, Loren, Land, Miriam, Mwirichia, Romano, Rohde, Manfred, Abt, Birte, Detter, John C, Woyke, Tanja, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Göker, Markus, Kyrpides, Nikos C, Klenk, Hans-Peter   +29 more
openaire   +6 more sources

Acidification increases abundances of Vibrionales and Planctomycetia associated to a seaweed-grazer system: potential consequences for disease and prey digestion efficiency [PDF]

, 2018
Ocean acidification significantly affects marine organisms in several ways, with complex interactions. Seaweeds might benefit from rising CO2 through increased photosynthesis and carbon acquisition, with subsequent higher growth rates.
Aires, Aires, Aires, Asnaghi, Asplund, Avelin Mary, Barbieri, Barneah, Beleneva, Bengtsson, Berg, Bodelier, Bodenhausen, Bourne, Bourne, Branch, Briggs, Burgess, Burke, Burke, Caporaso, Cardoso, Case, Cayrou, Chao, Chojnacka, Church, Clarke, Clarke, Cornwall, Cottrell, Currie, Davis, Devine, Dimitrieva, Dittmer, Dudek, Eberl, Edgar, Egan, Fabry, Fenchel, Fraune, Frey, Fuerst, Gachon, Garrity, Glöckner, Goffredi, Greiman, Gutow, Hacquard, Harley, Hassenrück, Head, Hentschel, Hollants, Holmstrom, Holmström, Hong, Huggett, Kerfahi, King, Kirchman, Koch, Kooperman, Kroeker, Lachnit, Lage, Lane, Liu, Longford, Mackie, Maki, Marzinelli, Matsuo, Matsuo, Mattila, McDonald, Mensch, Meron, Meusnier, Meziti, Moisander, Morrow, Nedashkovskaya, Olischläger, Parris, Patel, Perlman, Poore, Porzio, Sawabe, Schulze, Shah, Shnit-Orland, Simon, Singh, Singh, Song, Staufenberger, Sullam, Sunagawa, Suzuki, Taylor, Thomas, Thomas, Thurber, Tietjen, Tujula, Urabe, Van De Waal, Vezzulli, Vieira, Wang, Wang, Wang, Webster, Witt, Yuksel, Zimmer, Zimmer, Zimmer   +122 more
core   +4 more sources

Type VI secretion: a beginner's guide [PDF]

, 2008
Type VI secretion is a newly described mechanism for protein transport across the cell envelope of Gram-negative bacteria. Components that have been partially characterised include an IcmF homologue, the ATPase ClpV, a regulatory FHA domain protein and ...
Akeda, Baron, Bladergroen, Brzuszkiewicz, Christopher M Bailey, Dandekar, Das, Das, de Bruin, Dreyfus, Dudley, Dudley, Durocher, Economou, Finn, Folkesson, Gardy, Henderson, Johnson, Kulasekara, Lewis EH Bingle, Mark J Pallen, Mougous, Mougous, Nano, Pallen, Parsons, Pukatzki, Pukatzki, Purcell, Roest, Schell, Schlieker, Seshadri, Shalom, Sheahan, Srinivasa Rao, Tatusov, VanRheenen, Ventre, Wang, Weibezahn, Williams, Yahr, Yeo, Zheng, Zheng, Zusman   +47 more
core   +1 more source

A comparative in situ decomposition study using still born piglets and leaf litter from a deciduous forest [PDF]

, 2017
A cadaver and dead plant organic matter, or litter, are rich energy sources that undergo a complex decomposition process, which impact the surrounding environmental microbiota.
Nelson, A, Olakanye, AO, Ralebitso-Senior, TK   +2 more
core   +2 more sources