OpenML-Python: an extensible Python API for OpenML
OpenML is an online platform for open science collaboration in machine learning, used to share datasets and results of machine learning experiments. In this paper we introduce OpenML-Python, a client API for Python, opening up the OpenML platform for a wide range of Python-based tools.
Feurer, Matthias+8 more
openaire +3 more sources
A Python package for fast GPU‐based proton pencil beam dose calculation
Abstract Purpose Open‐source GPU‐based Monte Carlo (MC) proton dose calculation algorithms provide high speed and unparalleled accuracy but can be complex to integrate with new applications and remain slower than GPU‐based pencil beam (PB) methods, which sacrifice some physical accuracy for sub‐second plan calculation.
Mahasweta Bhattacharya+4 more
wiley +1 more source
A Python Package to Preprocess the Data Produced by Novonix High-Precision Battery-Testers
We present preparenovonix, a Python package that handles common issues encountered in data files generated with a range of software versions from the Novonix battery-testers.1 This package can also add extra information that makes easier coulombic ...
V. Gonzalez-Perez,+6 more
doaj +1 more source
Log file‐based quality assurance method for respiratory gating system
Abstract Background As medical linear accelerator technology advances, enabling higher dose rate deliveries, hypofractionation regimens has increased. This necessitates respiratory gating systems that synchronize radiation delivery with tumor position, requiring simple rigorous quality assurance (QA) to ensure treatment accuracy and patient safety ...
Wonjoong Cheon+7 more
wiley +1 more source
Porting the LSST Data Management Pipeline Software to Python 3 [PDF]
The LSST data management science pipelines software consists of more than 100,000 lines of Python 2 code. LSST operations will begin after support for Python 2 has been dropped by the Python community in 2020, and we must therefore plan to migrate the codebase to Python 3. During the transition period we must also support our community of active Python
arxiv
ALS plasma biomarkers reveal neurofilament and pTau correlate with disease onset and progression
Abstract Objective We performed a pilot screen to assess the utility of the NULISA™ (Nucleic‐acid‐Linked Immuno‐Sandwich Assay) platform in the identification of amyotrophic lateral sclerosis (ALS) biomarkers. Methods Plasma from 86 individuals (48 ALS, 18 asymptomatic C9orf72 repeat expansion carriers (AsymC9), and 20 healthy controls) was analyzed ...
Eleanor V. Thomas+10 more
wiley +1 more source
A Python Extension for the Massively Parallel Multiphysics Simulation Framework waLBerla [PDF]
We present a Python extension to the massively parallel HPC simulation toolkit waLBerla. waLBerla is a framework for stencil based algorithms operating on block-structured grids, with the main application field being fluid simulations in complex geometries using the lattice Boltzmann method.
arxiv +1 more source
Amygdala Neurodegeneration: A Key Driver of Visual Dysfunction in Parkinson's Disease
ABSTRACT Objective Visual disability in Parkinson's disease (PD) is not fully explained by retinal neurodegeneration. We aimed to delineate the brain substrate of visual dysfunction in PD and its association with retinal thickness. Methods Forty‐two PD patients and 29 controls underwent 3‐Tesla MRI, retinal spectral‐domain optical coherence tomography,
Asier Erramuzpe+15 more
wiley +1 more source
Python for education: the exact cover problem [PDF]
Python implementation of Algorithm X by Knuth is presented. Algorithm X finds all solutions to the exact cover problem. The exemplary results for pentominoes, Latin squares and Sudoku are given.
arxiv
Subthalamic Nucleus Oscillatory Characteristics in Meige, Cervical Dystonia and Generalized Dystonia
ABSTRACT Objective Deep brain stimulation offers a unique opportunity to record neural activity of the basal ganglia. While much work in dystonia has focused on the globus pallidus internus, expanding research to investigate subthalamic nucleus (STN) activity in various dystonia types is critical to provide a comprehensive understanding of dystonia ...
Zhu Guan‐Yu+14 more
wiley +1 more source