Interpretation of RNA Universe and Coding Potential Using IntRNA
This study constructs a multi‐channel deep learning framework IntRNA to interpret RNA universe and coding potential. IntRNA consistently performed the best among existing methods in various benchmarks. Moreover, IntRNA’s interpretability is also validated by real‐world analysis, which found some features indicating long‐distance contact between ...
Yunxia Wang +8 more
wiley +1 more source
32 examples of LLM applications in materials science and chemistry: towards automation, assistants, agents, and accelerated scientific discovery. [PDF]
Zimmermann Y +34 more
europepmc +1 more source
Querying Ontology Based Database Using OntoQL (An Ontology Query Language)
Stéphane Jean +2 more
openalex +2 more sources
RiboMicrobe: An Integrated Translatome Atlas for Microorganism
RiboMicrobe is a comprehensive database for Ribo‐seq data from prokaryotes, featuring 891 Ribo‐seq, 369 RNA‐seq, and 62 proteome datasets from 38 species. The database not only provides various data visualization results but also includes two sORF prediction models and a suit of bioinformatics tools for comparative analysis, facilitating easy access ...
Yingshun Zhou +12 more
wiley +1 more source
Redefining text-to-SQL metrics by incorporating semantic and structural similarity. [PDF]
Pinna G +4 more
europepmc +1 more source
AN EVALUATION OF A VISUAL QUERY LANGUAGE FOR INFORMATION SYSTEMS
Haifa Elsidani Elariss +2 more
openalex +1 more source
Treating Hearing Loss: From Cochlear Implantation to Gene Therapy
Cochlear implantation is the primary treatment for deafness, restoring functional hearing in over a million people. Recently, gene therapy has enabled biological hearing restoration in a small number of patients with OTOF‐related mutations. This perspective evaluates both approaches, concluding that cochlear implants will remain the standard for most ...
Fan‐Gang Zeng +4 more
wiley +1 more source
LLM-as-a-Judge: automated evaluation of search query parsing using large language models. [PDF]
Baysan MS +4 more
europepmc +1 more source
Revealing the Character of Coordination Bonding in 2D Metal–Organic Frameworks
Photoemission‐derived momentum maps and density functional theory calculations show the re‐appearance of frontier molecular orbital patterns at two distinct binding energies, a result of the formation of bonding and antibonding states below the Fermi edge from covalent hybridisation with the metal centres.
Dominik Brandstetter +7 more
wiley +1 more source
A deep learning framework called MolVisGNN is proposed to fuse 3D molecular visual information of drugs with multi‐source features, which proves the importance of 3D molecular visual information of drugs and the advancedness of this model in the field of drug discovery, and provides a reference for how to more comprehensively express small molecule ...
Zimai Zhang +9 more
wiley +1 more source

