Modeling reaction-diffusion of molecules on surface and in volume spaces with the E-Cell System [PDF]
The-Cell System is an advanced open-source simulation platform to model and analyze biochemical reaction networks. The present algorithm modules of the system assume that the reacting molecules are all homogeneously distributed in the reaction ...
Masaru Tomita, Satya N. V. Arjunan
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Lie symmetries of the Shigesada-Kawasaki-Teramoto system [PDF]
The Shigesada-Kawasaki-Teramoto system, which consists of two reaction-diffusion equations with variable cross-diffusion and quadratic nonlinearities, is considered.
Cherniha, Roman +2 more
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A link between microscopic and macroscopic models of self-organized aggregation
In some species, one of the roles of pheromonesis to influence aggregation behavior. We first proposea macroscopic cross-diffusion model for theself-organized aggregation of German cockroaches thatincludes directed movement due to an aggregation ...
Tadahisa Funaki +3 more
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The gradient discretisation method for the chemical reactions of biochemical systems [PDF]
Purpose – The main purpose of this paper is to introduce the gradient discretisation method (GDM) to a system of reaction diffusion equations subject to non-homogeneous Dirichlet boundary conditions.
Yahya Alnashri, Hasan Alzubaidi
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Localization-delocalization transition of a reaction-diffusion front near a semipermeable wall
The A+B --> C reaction-diffusion process is studied in a system where the reagents are separated by a semipermeable wall. We use reaction-diffusion equations to describe the process and to derive a scaling description for the long-time behavior of the ...
A. Büki +31 more
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Comment on ``Critical behavior of a two-species reaction-diffusion problem''
In a recent paper, de Freitas et al. [Phys. Rev. E 61, 6330 (2000)] presented simulational results for the critical exponents of the two-species reaction-diffusion system A + B -> 2B and B -> A in dimension d = 1.
C. De Dominicis +9 more
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Turing pattern or system heterogeneity? A numerical continuation approach to assessing the role of Turing instabilities in heterogeneous reaction-diffusion systems [PDF]
Jacob C. Vandenberg, Mark B. Flegg
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This paper is concerned with the stability of impulsive stochastic reaction-diffusion differential systems with mixed time delays. First, an equivalent relation between the solution of a stochastic reaction-diffusion differential system with time delays ...
Yanke Du, Yanlu Li, Rui Xu
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On a Conjecture of Goriely for the Speed of Fronts of the Reaction--Diffusion Equation
In a recent paper Goriely considers the one--dimensional scalar reaction--diffusion equation $u_t = u_{xx} + f(u)$ with a polynomial reaction term $f(u)$ and conjectures the existence of a relation between a global resonance of the hamiltonian system ...
A. Goriely +12 more
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Comparison of Synchronization Speed of Regular Networks of Reaction-Diffusion Systems of FitzHugh-Nagumo Type with Unidirectional and Bidirectional Coupling [PDF]
Phan Long +11 more
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