Results 241 to 250 of about 728,612 (289)

Nearest-Neighbor Effects in Short Unfolded Peptides: An Assessment of Molecular Dynamics Force Fields. [PDF]

J Chem Inf Model
Suresh A, Schweitzer-Stenner R, Urbanc B.   +2 more
europepmc   +1 more source

Profiling neoadjuvant therapy response in rectal cancer using meta‐analysis of publicly available transcriptomic RNA‐seq datasets

Molecular Oncology, EarlyView.
This study integrates publicly available transcriptomic datasets to identify molecular signatures associated with response to neoadjuvant chemoradiotherapy in locally advanced rectal cancer. By analyzing a combination of multiple cohorts with bioinformatics approaches, we reveal biological pathways and immune‐related features that may improve ...
Aleksandra Stanojevic, Rafael Stroggilos, Mladen Marinkovic, Ana Djuric, Suzana Stojanovic‐Rundic, Radmila Jankovic, Sergi Castellvi‐Bel, Remond J.A. Fijneman, Antonia Vlahou, Jerome Zoidakis, Milena Cavic   +10 more
wiley   +1 more source

DeepAden: an explainable machine learning method for predicting the substrate specificity of nonribosomal peptide synthetases. [PDF]

Nucleic Acids Res
Huang J, Ge L, Wu Y, Tian Y, Wu J, Gao Q, Li P, Meng S, Zhang H, Qin Z.   +9 more
europepmc   +1 more source

Adaptive Disorder as the Hallmark of Nanobodies Antigen-Binding Loops. [PDF]

J Chem Inf Model
Bagordo D, Trèves G, Santorsola M, Colombo G, Lescai F.   +4 more
europepmc   +1 more source

UniPocket: Unified Ligand and Cryptic Pocket Prediction from Protein Language Model Embeddings. [PDF]

ACM BCB
Zhao L, Zhai T, Shen L.
europepmc   +1 more source

A unified predictor of protein stability changes across all mutation types <i>via</i> implicit structure learning. [PDF]

Chem Sci
Tan H, Lin S, Xiong Y.
europepmc   +1 more source

HDX-MS-Guided computational modeling for rapid and accurate antibody-antigen interface mapping. [PDF]

MAbs
McMahon W, Zhang H, Li X, Oganesyan V, Payne S, Mehzabeen N, Dyk NV, Liu W, Howard W, Zhao P, Zhang Y, Fang M, Chen X, Mazor Y, Shi Y.   +14 more
europepmc   +1 more source

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Residual-free imprint for sensor definition

SPIE Proceedings, 2009
For the preparation of interdigitated sensor devices with nanometre sized electrodes a low-cost route is followed. The central technique used for electrode definition is nanoimprint. To imprint the larger contact areas as easy as the electrodes, the contacts are broken down into a grid.
A. Mayer, N. Bogdanski, S. Möllenbeck, H.-C. Scheer   +3 more
openaire   +1 more source

Cue definition and residual judgment

Organizational Behavior and Human Performance, 1974
Abstract A major problem in naturalistic studies is the defining of cues. The problem of cue definition leads to a consideration of the residual variance in modelling the judge. The part of judgment that cannot be modelled (i.e., the residual) is assumed to consist of cues not adequately defined and mis-specification of the integration function.
openaire   +2 more sources

Definition of a New Information-Based Per-Residue Quality Parameter

Journal of Biomolecular NMR, 2005
For biomolecular NMR structures typically only a poor correspondence is observed between statistics derived from the experimental input data and structural quality indicators obtained from the structure ensembles. Here, we investigate the relationship between the amount of available NMR data and structure quality.
Nabuurs, SB, Krieger, E, Spronk, CA, Nederveen, AJ, Vriend, G, Vuister, GW   +5 more
openaire   +5 more sources