Results 131 to 140 of about 1,560,298 (222)

SnowyOwl: accurate prediction of fungal genes by using RNA-Seq and homology information to select among ab initio models

open access: yesBMC Bioinformatics, 2014
BackgroundLocating the protein-coding genes in novel genomes is essential to understanding and exploiting the genomic information but it is still difficult to accurately predict all the genes.
I. Reid   +10 more
semanticscholar   +1 more source

Diagnosis and discovery of fungal viruses using deep sequencing of small RNAs

open access: yesJournal of General Virology, 2015
Analysis of virus-derived small RNAs with high-throughput sequencing has been successful for detecting novel viruses in plants and invertebrates. However, the applicability of this method has not been demonstrated in fungi, although fungi were among the first organisms reported to utilize RNA silencing.
Vainio, Eeva   +5 more
openaire   +4 more sources

Comparative transcriptomic analysis unveils interactions between the regulatory CarS protein and light response in Fusarium [PDF]

open access: yes, 2019
Background The orange pigmentation of the agar cultures of many Fusarium species is due to the production of carotenoids, terpenoid pigments whose synthesis is stimulated by light.
Limón Mirón, María del Carmen   +5 more
core   +1 more source

Fungal virulence and development is regulated by alternative pre-mRNA 3'end processing in Magnaporthe oryzae.

open access: yesPLoS Pathogens, 2011
RNA-binding proteins play a central role in post-transcriptional mechanisms that control gene expression. Identification of novel RNA-binding proteins in fungi is essential to unravel post-transcriptional networks and cellular processes that confer ...
Marina Franceschetti   +6 more
doaj   +1 more source

Prioritization of Drugs for Fungal Keratitis Eye Infections: An In-Silico Analysis

open access: yesApplied Sciences, 2019
The fungal keratitis (FK) infections that cause cornea inflammations are more virulent than other bacterial keratitis infections and remain one of the most ethereal and challenging infections for ophthalmologists to diagnose and treat.
Punitha Thambidurai   +4 more
doaj   +1 more source

The unseen world: environmental microbial sequencing and identification methods for ecologists [PDF]

open access: yes, 2014
Archaea, bacteria, microeukaryotes, and the viruses that infect them (collectively “microorganisms”) are foundational components of all ecosystems, inhabiting almost every imaginable environment and comprising the majority of the planet’s organismal and ...
Aronson, Emma   +4 more
core   +1 more source

Fungicide Resistance Genetics of Apple Scab fungus Venturia inaequalis [PDF]

open access: yes, 2015
Apple scab, caused by the ascomycete fungus Venturia inaequalis, is considered the most devastating disease on domestic apple crops. Apples are the most important cultivated crop in temperate regions and the United States produced about 4.6 million tons ...
Reddel, Alexis LT
core   +1 more source

RNAi technology: A Novel approaches against fungal infections

open access: yesResearch in Molecular Medicine, 2014
Despite the introduction of new antifungal agents, resistances to antifungal therapy continue to increase and outcome of invasive fungal infections treatment is frequently suboptimal.
Maryam Moazeni   +3 more
doaj  

New lineages of RNA viruses from clinical isolates of Rhizopus microsporus revealed by fragmented and primer-ligated dsRNA sequencing (FLDS) analysis

open access: yesmSphere
Rhizopus microsporus is a species in the order Mucorales that is known to cause mucormycosis, but it is poorly understood as a host of viruses. Here, we examined 25 clinical strains of R.
Wasiatus Sa'diyah   +8 more
doaj   +1 more source

Diagnostic value of DNA or RNA-based metagenomic next-generation sequencing in lower respiratory tract infections

open access: yesHeliyon
Objectives: We aimed to evaluate and compare the diagnostic performance of RNA-mNGS and DNA-mNGS workflow in bacterial pneumonia, fungal pneumonia and tuberculosis.
Jiafu Song   +4 more
doaj  

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