VirBinn improves viral genome binning from metagenomic Hi-C through graph diffusion. [PDF]
Wang S, Du Y.
europepmc +1 more source
ntRoot: Genetic Ancestry Inference Across Diverse Genomic Data Types
Abstract Genetic ancestry is encoded in our genomes, reflecting the genealogical history of individuals and populations. This information is increasingly recognized as an important variable in large‐scale population studies, where it is used to correct for population stratification, as well as in clinical applications, since disease risk can vary ...
Lauren Coombe +3 more
wiley +1 more source
Gut Microbiome in Sporadic Cerebral Small Vessel Disease: MRI-Defined Phenotypes, Mechanistic Evidence, and Nutritional Implications for Brain Aging. [PDF]
Jarecsny T +10 more
europepmc +1 more source
This Review proposes a microbiome–premetastatic brain niche axis connecting gut, lung, and intratumoral microbes with metabolites, blood–brain barrier remodeling, neuroimmune priming, and brain metastasis in NSCLC. It integrates current evidence while distinguishing established mechanisms from associations and hypotheses requiring prospective and ...
Long Liang +8 more
wiley +1 more source
Methodological bias shapes the interpretation of the urinary microbiome in low-biomass systems. [PDF]
Méndez-Sacta V +4 more
europepmc +1 more source
Comparing the effect of faecal microbiota and faecal filtrate transplantations on intestinal health in weaned piglets. [PDF]
Tort-Miró C +11 more
europepmc +1 more source
Lost and Found: Western Honey Bee (Apis mellifera) Matrix Metalloproteinase 1
Despite considerable overall improvements in the Western honey bee (Apis mellifera) reference genome over the past two decades, some genes are missing in the current reference assembly (Amel_HAv3.1), potentially interfering with the meaningfulness of downstream analyses.
Jessica Braunisch +4 more
wiley +1 more source
Choosing Between Short-Read 16S, Full-Length ONT 16S, and Long-Read Shotgun Metagenomics for Soil Microbiome Studies: A Critical Review of the Benchmarking Evidence. [PDF]
Albastaki A, Smith J.
europepmc +1 more source
Among wild long‐tailed macaques in Thailand, we tested the relative effects of individuals' sociality, compared to their exposure to environmental factors, and their demographic characteristics, on the relative abundance and assembly of gut microbiota.
Krishna Balasubramaniam +9 more
wiley +1 more source
Advances and Challenges in Forensic Genetics. [PDF]
Cortellini V, Argirò N.
europepmc +1 more source

