Characterization and analysis of multi-organ full-length transcriptomes in Sphaeropteris brunoniana and Alsophila latebrosa highlight secondary metabolism and chloroplast RNA editing pattern of tree ferns [PDF]
BMC Plant BiologyBackground Sphaeropteris brunoniana and Alsophila latebrosa are both old relict and rare tree ferns, which have experienced the constant changes of climate and environment. However, little is known about their high-quality genetic information and related
Minghui Li, Yingjuan Su, Su Yingjuan
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Complete chloroplast genome of Sphaeropteris brunoniana (Cyatheaceae) [PDF]
Mitochondrial DNA. Part B. Resources, 2020 Illumina sequencing was employed to determine the complete chloroplast (cp) genome sequence of Sphaeropteris brunoniana (S. brunoniana), which is a relict fern. The cp genome of S. brunoniana is indeed a circular DNA molecule with 156,659 bp. It includes
Ming Zhu +6 more
doaj +6 more sources
Global Ecology and ConservationSphaeropteris brunoniana, a large arborescent fern, holds significant ecological and medicinal value. However, it is endangered in China and globally due to crop cultivation, human activities, and climate change. This study analyzed the genetic diversity
Ting Ma
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Journal of Systematics and Evolution, 2011 In this study, we analyzed the genetic structure and phylogeography of Sphaeropteris brunoniana from China and Laos. Combining cpDNA trnL-trnF and atpB-rbcL sequence variations, five haplotypes were identified from the 10 investigated populations. Moderate haplotype diversity (h = 0.66580) and low nucleotide diversity (pi = 0.23 x 10(-3)) were detected.
Kai-Yun Guan
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Phylogenetic significance of the characteristics of simple sequence repeats at the genus level based on the complete chloroplast genome sequences of Cyatheaceae. [PDF]
Ecol Evol, 2021 Whether chloroplast genome SSRs can be used to classify Cyatheaceae species has not yet been studied. Therefore, the chloroplast genomes of eight Cyatheaceae species were sequenced by our team, and their SSR characteristics were compared and statistically analyzed.
Zhu M +5 more
europepmc +2 more sources
Additional file 1: Fig S1. Statistics of Nr annotations of S. brunoniana (top ten). (a)Root. (b)Rachis. (C)Pinna. Fig S2. Structural prediction of three-organ full-length transcriptomes of A. latebrosa. (a) The quantity of lncRNAs in three organs. (b) Transcription factor family distribution (top ten). (c) Distribution of SSR motifs.
Peng, Yang +4 more
openaire +2 more sources
One or more species? GBS sequencing and morphological traits evidence reveal species diversification of <i>Sphaeropteris brunoniana</i> in China [PDF]
Biodiversity Science, 2019 Kang Ming
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, 2021 FIGURE 3. Fiddleheads and sori on pinnule segments.—A & D. Sphaeropteris brunoniana.—B & E. S. guangxiensis.—C & F. S. hainanensis.Published as part of Gu, Yu-Feng, Jiang, Ri-Hong, Liu, Bao-Dong & Yan, Yue-Hong, 2021, Sphaeropteris guangxiensis Y. F. Gu &
Gu, Yu-Feng +3 more
core +1 more source
Complete chloroplast genome molecular structure, comparative and phylogenetic analyses of Sphaeropteris lepifera of Cyatheaceae family: a tree fern from China. [PDF]
Sci Rep, 2023 Hu Q +8 more
europepmc +1 more source
Phylogenomic analysis, cryptic species discovery, and DNA barcoding of the genus Cibotium in China based on plastome data. [PDF]
Front Plant Sci, 2023 Jiang RH +8 more
europepmc +1 more source