Results 111 to 120 of about 510,563 (307)

Distance Based Algorithms for Small Biomolecule Classification

open access: yes, 2006
Structural similarity search among small molecules is a standard tool used in molecular classification and insilico drug discovery. The effectiveness of this general approach depends on how well the following problems are addressed.
Artem Cherkasov   +3 more
core  

Measuring the Structural Similarity among XML Documents and DTDs [PDF]

open access: yes, 2008
Measuring the structural similarity between an XML document and a DTD has many relevant applications that range from document classification and approximate structural queries on XML documents to selective dissemination of XML documents and document ...
E. Bertino   +5 more
core   +1 more source

Salmonella lipopolysaccharide‐containing supported lipid bilayers as platforms to study bacteriophage interactions

open access: yesFEBS Letters, EarlyView.
We present robust protocols for the preparation of supported lipid bilayers (SLBs) incorporating either Salmonella smooth LPS or outer membrane vesicles (OMVs). We use a combination of quartz crystal microbalance with dissipation (QCM‐D) and fluorescence microscopy to both characterize the SLBs of various compositions and to probe their interactions ...
Hudson P. Pace   +6 more
wiley   +1 more source

Binding modes vs. structural similarity.

open access: yes, 2016
IRMSD is plotted against (a) complex structural similarity (the smallest of the TM-score and normalized SARA score) and (b) protein structure similarity, in all-to-all pairwise comparison of 439 binary complexes.
Jinfang Zheng (3135294)   +3 more
core   +1 more source

Noncontiguous Atom Matching Structural Similarity Function

open access: yes, 2016
Measuring similarity between molecules is a fundamental problem in cheminformatics. Given that similar molecules tend to have similar physical, chemical, and biological properties, the notion of molecular similarity plays an important role in the ...
Ana L. Teixeira (443973)   +1 more
core   +2 more sources

Inflationary tilings with a similarity structure

open access: yesCommentarii Mathematici Helvetici, 1994
This paper deals with tilings, called similarity tilings, of the plane by tiles with (up to similarity) only finitely many shapes and finitely many surroundings (or matching conditions). It is called inflationary if there is an expanding linear map which maps tiles onto unions of tiles.
openaire   +2 more sources

PARK(ing) time–How park deficiency affects the biological clock in a Drosophila model of Parkinson's disease

open access: yesFEBS Letters, EarlyView.
Drosophila park mutants serve as a model for Parkinson's disease. We used this strain to investigate the connection between oxidative stress and the circadian clock mechanism. We showed that increased oxidative stress affects the physiology of pacemaker cells, disrupting their daily structural plasticity. Lack of rhythmic signaling from pacemaker cells
Kamila Zientara   +3 more
wiley   +1 more source

Structural insights and therapeutic targets in Acinetobacter baumannii capsule biosynthesis

open access: yesFEBS Letters, EarlyView.
Hypervirulent KL49 A. baumannii's capsular polysaccharide contains the nonulosonic acid 8‐epi‐Leg5,7Ac2, synthesized by epimerization via ElaA, ElaB, and ElaC. Crystal structures of ElaA, ElaB, and ElaC reveal their role in CMP‐Leg5,7Ac2 synthesis and regioselective C8 epimerization.
Woo Cheol Lee   +7 more
wiley   +1 more source

Donor Derivative Incorporation: An Effective Strategy toward High Performance All‐Small‐Molecule Ternary Organic Solar Cells

open access: yesAdvanced Science, 2019
Thick‐film all‐small‐molecule (ASM) organic solar cells (OSCs) are preferred for large‐scale fabrication with printing techniques due to the distinct advantages of monodispersion, easy purification, and negligible batch‐to‐batch variation.
Hua Tang   +11 more
doaj   +1 more source

Semi-Supervised Classification With Graph Structure Similarity and Extended Label Propagation

open access: yesIEEE Access, 2019
Graph-based semi-supervised learning (GSSL) has attracted great attention over the past decade. However, there are still several open problems: (1) how to construct a graph that effectively represents the underlying structure of data and (2) how to ...
Junliang Ma, Nannan Wang, Bing Xiao
doaj   +1 more source

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