A Java program for non-parametric statistic comparison of community structure [PDF]
Computational Ecology and Software, 2011 The Java algorithm to statistically compare structure difference of two communities was presented in this study. Euclidean distance, Manhattan distance, Pearson correlation, Point correlation, quadratic correlation and Jaccard coefficient were included ...
WenJun Zhang
doaj
Prediction and validation of novel SigB regulon members in Bacillus subtilis and regulon structure comparison to Bacillales members. [PDF]
BMC Microbiol, 2023 Yeak KYC +4 more
europepmc +1 more source
Measurement and comparison of soil structures.
Applied Mathematical Modelling, 1981 Abstract A model is established to describe the structures of tilled soils using Markov chain theory. The effectiveness of the model in describing soil structures, and its accuracy when the model parameters are determined from limited field data is investigated by a consideration of variances of the transition probabilities and Markov chain state ...
Hewitt, J. S., Dexter, A. R.
openaire +1 more source
Time after time – circadian clocks through the lens of oscillator theory
FEBS Letters, EarlyView.Oscillator theory bridges physics and circadian biology. Damped oscillators require external drivers, while limit cycles emerge from delayed feedback and nonlinearities. Coupling enables tissue‐level coherence, and entrainment aligns internal clocks with environmental cues.
Marta del Olmo +2 more
wiley +1 more source
Linear and Nonlinear Effects in Connectedness Structure: Comparison between European Stock Markets. [PDF]
Entropy (Basel), 2022 Karkowska R, Urjasz S.
europepmc +1 more source
The newfound relationship between extrachromosomal DNAs and excised signal circles
FEBS Letters, EarlyView.Extrachromosomal DNAs (ecDNAs) contribute to the progression of many human cancers. In addition, circular DNA by‐products of V(D)J recombination, excised signal circles (ESCs), have roles in cancer progression but have largely been overlooked. In this Review, we explore the roles of ecDNAs and ESCs in cancer development, and highlight why these ...
Dylan Casey, Zeqian Gao, Joan Boyes
wiley +1 more source
A Java algorithm for non-parametric statistic comparison of network structure [PDF]
Network Biology, 2011 A Java algorithm to statistically compare between-network structure difference was developed. In this algorithm, Euclidean distance, Manhattan distance, Chebyshov distance, and Pearson correlation were available to measure between-network difference. The
WenJun Zhang
doaj
FEBS Letters, EarlyView.Cryptochrome and PAS/LOV proteins play intricate roles in circadian clocks where they act as both sensors and mediators of protein–protein interactions. Their ubiquitous presence in signaling networks has positioned them as targets for small‐molecule therapeutics. This review provides a structural introduction to these protein families.
Eric D. Brinckman +2 more
wiley +1 more source
Synthesis and crystal structure of (NH4)[Ni3(HAsO4)(AsO4)(OH)2]
Acta Crystallographica Section E: Crystallographic CommunicationsThe title compound, ammonium trinickel(II) hydrogen arsenate arsenate dihydroxide, was synthesized under hydrothermal conditions. Its crystal structure is isotypic with that of K[Cu3(HAsO4)(AsO4)(OH)2] and is characterized by pseudo-hexagonal (001) 2 ...
Felix Eder, Matthias Weil
doaj +1 more source
AMIGOS III: pseudo-torsion angle visualization and motif-based structure comparison of nucleic acids. [PDF]
Bioinformatics, 2022 Shine M, Zhang C, Pyle AM.
europepmc +1 more source