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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

open access: yesBioinformatics, 2006
UNLABELLED RAxML-VI-HPC (randomized axelerated maximum likelihood for high performance computing) is a sequential and parallel program for inference of large phylogenies with maximum likelihood (ML).
Alexandros Stamatakis
exaly   +2 more sources

A few Ascomycota taxa dominate soil fungal communities worldwide

open access: yesNature Communications, 2019
Despite having key functions in terrestrial ecosystems, information on the dominant soil fungi and their ecological preferences at the global scale is lacking. To fill this knowledge gap, we surveyed 235 soils from across the globe. Our findings indicate
Eleonora Egidi   +2 more
exaly   +2 more sources

Culturing of ‘unculturable’ human microbiota reveals novel taxa and extensive sporulation

open access: yesNature, 2016
Our intestinal microbiota harbours a diverse bacterial community required for our health, sustenance and wellbeing. Intestinal colonization begins at birth and climaxes with the acquisition of two dominant groups of strict anaerobic bacteria belonging to
Hilary P Browne   +2 more
exaly   +2 more sources

Composition of the Oral Microbiome in Patients with Coronary Artery Disease [PDF]

open access: yesJournal of Clinical and Diagnostic Research, 2020
Introduction: Distinct microbial communities reside in the oral cavity and the composition of the oral microbiota has important implications for human health and disease.
Thangam Menon   +2 more
doaj   +1 more source

Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee

open access: yesArchives of Virology, 2023
This article summarises the activities of the Bacterial Viruses Subcommittee of the International Committee on Taxonomy of Viruses for the period of March 2021−March 2022. We provide an overview of the new taxa proposed in 2021, approved by the Executive
D. Turner   +35 more
semanticscholar   +1 more source

New for Azerbaijan records of agaricoid fungi collected in Shaki District

open access: yesUkrainian Botanical Journal, 2021
The article provides information about new for Azerbaijan records of agaricoid fungi collected during the field trips in 2016–2019. In particular, 18 taxa (Agaricus porphyrizon, Amanita strobiliformis, Aureoboletus gentilis, A.
Mustafabayli E.H.   +2 more
doaj   +1 more source

THE GROWTH, DEVELOPMENT AND USE OF NEW TAXA OF THE GENUS WEIGELA THUNB. IN GREEN SPACE DESIGN IN THE REPUBLIC OF MOLDOVA [PDF]

open access: yesJournal of Plant Development, 2022
The peculiarities of growth, development and use of 5 new taxa of the genus Weigela Thunb. have been described. The studied taxa – Weigela florida 'Alexandra', 'Carlton', 'Caricature', 'Minor Black' and 'Pink Princess' – differ in size, crown diameter ...
Ion ROSCA   +3 more
doaj   +1 more source

Plant cover of pasture ecosystem located in the vicinity of Mužlja, Serbia [PDF]

open access: yesRatarstvo i Povrtarstvo, 2012
The plant cover of the natural pastures located in the vicinity of the town of Mužlja (Serbia - the Vojvodina Province - Banat) is the result of their floristic (140 species, 7 subspecies, 3 varieties and 5 forms), plant geographic (1 endemic species and
Knežević Aleksa   +3 more
doaj   +1 more source

Specialized metabolic functions of keystone taxa sustain soil microbiome stability

open access: yesMicrobiome, 2021
Background The relationship between biodiversity and soil microbiome stability remains poorly understood. Here, we investigated the impacts of bacterial phylogenetic diversity on the functional traits and the stability of the soil microbiome. Communities
Weibing Xun   +9 more
semanticscholar   +1 more source

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