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TCGA Lung Cancer Analysis Pipeline [PDF]

open access: possibleProceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics, 2018
Cancer cells contain thousands of mutated genes, differential copy numbers and differential expressions of genes. The progression of cancer differs from patient to patient. Identification of key proteins and pathways of individual patient's molecular profile has become important for personalized medicine.
Tuğba Önal-Süzek, Talip Zengin
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TCGA-KIRC-AI-study

2022
raw data for TCGA-KIRC ...
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Abstract IA1: Mining the TCGA

Clinical Cancer Research, 2013
Abstract The Cancer Genome Atlas (TCGA) has recently completed its first formal analysis of the genomic and clinical data from the ovarian carcinoma project. This analysis has confirmed previous knowledge and discovered new insights into this challenging disease.
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A Practical Guide to The Cancer Genome Atlas (TCGA)

2016
The Cancer Genome Atlas (TCGA) is one of the most ambitious and successful cancer genomics programs to date. The TCGA program has generated, analyzed, and made available genomic sequence, expression, methylation, and copy number variation data on over 11,000 individuals who represent over 30 different types of cancer.
Zhining Wang   +2 more
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Cancer genomics and the TCGA project

Clinical Cancer Research, 2010
Abstract Large-scale cancer genomics projects such as The Cancer Genome Atlas (TCGA) and the International Cancer Genomics Consortium (ICGC) will sequence tens of thousands of tumors in the new few years, along with matched normal blood samples and other normal tissues.
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