Hybridization capture increases on-target nanopore sequencing of plant RNA tobamovirus- derived cDNA libraries [PDF]
High-throughput sequencing (HTS) can support plant virus surveillance, but host nucleic acids often reduce on-target read recovery. We evaluated a targeted hybridization-capture workflow in which barcoded double-stranded cDNA (ds-cDNA) libraries ...
Andres S. Espindola +6 more
doaj +3 more sources
Genome-Wide Variation Profile of the Genus Tobamovirus [PDF]
The genus Tobamovirus belongs to the family Virgaviridae, and the genome consists of monopartite, positive, single-strand RNA. Most species contain four open reading frames encoding four essential proteins.
Amany E. Gomaa, Hernan Garcia-Ruiz
doaj +3 more sources
Most viral gene products function inside cells in the presence of various host proteins, nucleic acids, and lipids. Thus, viral gene products come into direct contact with these molecules.
Kazuhiro Ishibashi +2 more
doaj +2 more sources
Viral Infection Risk Driven by Ecological Trait Susceptibility to Habitat Heterogeneity [PDF]
ABSTRACT Traits for host exploitation that drive the transmission of disease and pathogen emergence are expressed in heterogenous environments. To advance the development of accurate forecasting of infection risk and emergence, determining constraints on ecological strategies for resource use by pathogens over a range of host communities is essential ...
Adrian D. Zamfir +5 more
wiley +2 more sources
Tobamoviruses CP Proteins Hijack Light‐Induced Protein (NbLIP1) to Promote Viral Replication by Facilitating VRO Formation [PDF]
ABSTRACT Tobamoviruses establish viral replication organelles (VROs) on the host endoplasmic reticulum (ER) for their replication, a process demanding substantial different types of lipids. However, how viruses efficiently transfer these lipids from other compartments like chloroplasts remains incompletely understood.
Haoyu Chen +10 more
wiley +2 more sources
Tobamoviruses: Advances in Molecular Biology, Host Interactions and Integrated Disease Management [PDF]
Tobamoviruses (viruses in the genus Tobamovirus, family Virgaviridae) lead to major yield losses in economically important crops around the world. In this review, we go beyond the canonical gene expression framework by integrating recent discoveries of ...
Gege Li +8 more
doaj +2 more sources
Cause of the Scion Death in Green Pepper Grafting System by a Tobamovirus
This experiment was attempted to investigate a cause of the scion death in green pepper grafting system. A tobamovirus particle examined in the rootstock of the sample but not in the scion showing necrosis.
Gug-Seoun Choi +4 more
doaj +2 more sources
Rewiring of auxin and MAPK signaling is associated with contrasting shoestring and fern-like manifestations in ToBRFV-A134T-infected tomato [PDF]
IntroductionTomato brown rugose fruit virus (ToBRFV) is a rapidly spreading plant pathogen that threatens tomato cultivation worldwide, leading to economic losses.
Ori Molad +6 more
doaj +2 more sources
Insights Into Virus‐Encoded RNA Silencing Suppressors Across Viral Families: A Focus on Viruses Infecting Solanaceae Crops [PDF]
ABSTRACT Viral suppressors of RNA silencing (VSRs) are proteins that interfere with antiviral defense mechanisms and enhance infection. For plant viruses, VSRs can be encoded in viral genomes and satellite molecules and play an important role in the virus's life cycle and in overcoming host defenses.
Saumik Basu +7 more
wiley +2 more sources
The durable resistance gene Tm-22 remains partially resistant to tomato brown rugose fruit virus. [PDF]
The tomato Tm-22 gene is a highly effective, and durable resistance gene in agriculture that has protected tomato production against viruses of the Tobamovirus genus, such as tomato mosaic virus (ToMV) and tobacco mosaic virus (TMV) for over 60 years ...
Shaokang Zhang +2 more
doaj +2 more sources

