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Path histogram distance and complete subtree histogram distance for rooted labelled caterpillars
A rooted labelled caterpillar (a caterpillar, for short) is a rooted labelled unordered tree transformed to a path after removing all the leaves in it. In this paper, we discuss two histogram distance between caterpillars.
Taiga Kawaguchi +2 more
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A Tree Similarity Computation Method Based on Structrue Feature [PDF]
In order to efficiently compute the similarity of tree,a method of computing the tree similarity based on structure feature is proposed.Firstly,all non-isomorphic sub-trees of K nodes are constructed,then the number of the isomorphic sub-tree from tree ...
CHEN Yanhua,LI Jian
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Clustering of Synthetic Routes Using Tree Edit Distance [PDF]
We present a novel algorithm to compute the distance between synthesis routes based on a tree edit distance calculation. Such distances can be used to cluster synthesis routes from a retrosynthesis prediction tool. We show that the clustering of routes from a retrosynthesis analysis is performed in less than ten seconds on average, and only constitutes
Samuel Genheden +2 more
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Penilaian Kesamaan Entity Relationship Diagram dengan Algoritme Tree Edit Distance
Main competency in database learning is ability to design Entity Relationship Diagram (ERD). Generally, lecturer gives task to students to design an ERD with some requirements. These ERDs are then assessed by comparing them with the answers. In practice,
Humasak Simanjuntak +5 more
doaj +1 more source
Authenticating q-Gram-Based Similarity Search Results for Outsourced String Databases
Approximate string searches have been widely applied in many fields, such as bioinformatics, text retrieval, search engines, and location-based services (LBS).
Liangyong Yang +4 more
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High throughput experimental approaches are increasingly allowing for the quantitative description of cellular and organismal phenotypes. Distilling these large volumes of complex data into meaningful measures that can drive biological insight remains a ...
Gunalan Natesan +3 more
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Learning Stochastic Tree Edit Distance [PDF]
Trees provide a suited structural representation to deal with complex tasks such as web information extraction, RNA secondary structure prediction, or conversion of tree structured documents. In this context, many applications require the calculation of similarities between tree pairs. The most studied distance is likely the tree edit distance (ED) for
Bernard, Marc +2 more
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Optimized Signature Selection for Efficient String Similarity Search
In this paper, we study the problem of string similarity search to retrieve in a database all strings similar to a query string within a given threshold. To measure the similarity between strings, we use edit distance.
Taegyoung Lee, Tae-Sun Chung, Jongik Kim
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Weighted Edit Distance Computation: Strings, Trees, and Dyck
Given two strings of length $n$ over alphabet $Σ$, and an upper bound $k$ on their edit distance, the algorithm of Myers (Algorithmica'86) and Landau and Vishkin (JCSS'88) computes the unweighted string edit distance in $\mathcal{O}(n+k^2)$ time. Till date, it remains the fastest algorithm for exact edit distance computation, and it is optimal under ...
Das, D. +4 more
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Generating Trees for Comparison
Tree comparisons are used in various areas with various statistical or dissimilarity measures. Given that data in various domains are diverse, and a particular comparison approach could be more appropriate for specific applications, there is a need to ...
Danijel Mlinarić +2 more
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