Results 231 to 240 of about 101,371 (270)

Detection of a Conserved Bacterial Symbiosis in non-frugivorous Australian Fruit Flies (Diptera, Tephritidae, Tephritinae) Supports its Widespread Association. [PDF]

Microb Ecol
Carofano I, Martinez-Sañudo I, Riegler M, Hancock DL, Morrow JL, Mazzon L.   +5 more
europepmc   +1 more source

Horizontal transfer of matrix metalloproteinase genes links early animal and microbial evolution. [PDF]

Biol Direct
Parsons C, Fournier GP.
europepmc   +1 more source

Gene Transfer Among Viruses Substantially Contributes to Gene Gain of Giant Viruses. [PDF]

Mol Biol Evol
Wu J, Meng L, Gaïa M, Hikida H, Okazaki Y, Endo H, Ogata H.   +6 more
europepmc   +1 more source

Integrating phylogenies with chronology to assemble the tree of life. [PDF]

Front Bioinform
Barba-Montoya J, Craig JM, Kumar S.
europepmc   +1 more source

CORGIAS: identifying correlated gene pairs by considering evolutionary history in a large-scale prokaryotic genome dataset. [PDF]

NAR Genom Bioinform
Nishimura Y, Omae K, Tominaga K, Iwasaki W.   +3 more
europepmc   +1 more source

Evolutionary analysis of Trehalose breakdown pathways

Ganesh Muthu G, Laxman S, Seshasayee ASN.   +2 more
europepmc   +1 more source

Automated genome mining predicts structural diversity and taxonomic distribution of peptide metallophores across bacteria

Reitz ZL, Pourmohsenin B, Susman M, Thomsen E, Roth D, Butler A, Ziemert N, Medema MH.   +7 more
europepmc   +1 more source

Convergent genomic responses of human gut bacteria to variations in industrialization

Rühlemann M, Szánthó LL, Waschina S, Moitinho-Silva L, Mews LK, Camarena JF, Jebens H, Costa J, Juimo V, Fezeu A, Agyei A, Afihene MY, Asibey SO, Awuku YA, Duah A, Nartey YA, Ibrahim F, Lim YAL, Pin TM, Onyekwere C, Rusine J, Mwikarago IE, Baines J, Franke A, Szöllősi GJ, Xavier R, Alm EJ, Groussin M, Poyet M.   +28 more
europepmc   +1 more source

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Rooting Species Trees Using Gene Tree-Species Tree Reconciliation

2022
Interpreting phylogenetic trees requires a root, which provides the direction of evolution and polarizes ancestor-descendant relationships. But inferring the root using genetic data is difficult, particularly in cases where the closest available outgroup is only distantly related, which are common for microbes.
Brogan J, Harris, Paul O, Sheridan, Adrián A, Davín, Cécile, Gubry-Rangin, Gergely J, Szöllősi, Tom A, Williams   +5 more
openaire   +2 more sources

Unrooted Tree Reconciliation: A Unified Approach

IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2013
Tree comparison functions are widely used in phylogenetics for comparing evolutionary trees. Unrooted trees can be compared with rooted trees by identifying all rootings of the unrooted tree that minimize some provided comparison function between two rooted trees.
Pawel, Górecki, Oliver, Eulenstein, Jerzy, Tiuryn   +2 more
openaire   +2 more sources