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DNA Barcoding of Waldsteinia Willd. (Rosaceae) Species Based on ITS and trnH-psbA Nucleotide Sequences

Springer Proceedings in Earth and Environmental Sciences, 2019
The methods of biological species identification using nucleotide sequences of short genome regions (DNA markers) are actively developed. This principle formed the basis of the genetic database purposed the identification for all living organisms—Barcode of Life Data System (BOLD). In our study, we estimated the Internal transcribed spacer region (ITS)
M. Protopopova   +3 more
semanticscholar   +2 more sources

Molecular characterization of Lathyrus species using chloroplast DNA trnH-psbA

Biochemical Systematics and Ecology, 2014
Lathyrus L. is an important genus contributing in human food, animal feed and fodder. The genetic variation is studied among and within six species sampled over a large geographical area: Lathyrus cicera, Lathyrus sativus, Lathyrus sylvestris, Lathyrus tuberosus, Lathyrus ochrus and Lathyrus aphaca. The phylogenetic relationship among these species was
G. Maroua   +4 more
semanticscholar   +2 more sources

Phylogenetic utility of the trnH–psbA IGR and stem-loop diversity of the 3′ UTR in Cactaceae (Caryophyllales)

Plant Systematics and Evolution, 2017
The ultrastructure of the psbA–trnH intergenic region (hereafter IGR) of the Cactaceae was characterised based on 642 sequences identifying a conserved region and a mutational hot spot with different evolutionary rates. The first section of the IGR includes a highly conserved 3′ UTR of the psbA containing a TATA-box and a stem-loop.
Patricia Hernández-Ledesma   +1 more
semanticscholar   +2 more sources

DNA barcoding of Actinidia (Actinidiaceae) using internal transcribed spacer, matK, rbcL and trnH-psbA, and its taxonomic implication

New Zealand Journal of Botany, 2018
Actinidia is taxonomically difficult and economically important. Four traditional barcoding markers, internal transcribed spacer (ITS), rbcL, matK and trnH-psbA, were used to identify the 29 Actinidia species sampled.
Bao Weihong, Dawei Li, Xinwei Li
semanticscholar   +1 more source

[The utility of trnH-psbA gene for phylogenetic analysis of Huperziaceae and plant barcoding].

Zhong yao cai = Zhongyaocai = Journal of Chinese medicinal materials, 2011
The purpose of study was to discover the phylogenetic relations and plant barcoding of 17 plants from Huperziaceae.Phylogenetic tree of chloroplast trnH-psbA gene of 17 plants from Huperziaceae was constructed by software.It showed that Huperziaceae could be divided into two genera Huperzia and Phlegmariurus and bootstrap value reached 91%.Holub and ...
Hao, Shao   +5 more
openaire   +2 more sources

Molecular phylogeny and taxonomy of Tanacetum L. (Compositae, Anthemideae) inferred from nrDNA ITS and cpDNA trnH–psbA sequence variation

Plant Systematics and Evolution, 2012
The genus Tanacetum L. consists of around 160 species of the Compositae-Anthemideae. It holds a crucial position for understanding the phylogeny of the tribe and its subtribal and generic classification. The present study focuses on the phylogenetic relationships of the species and aims at a discussion of the infrageneric classification and boundaries ...
A. Sonboli   +3 more
semanticscholar   +2 more sources

Phylogeny and maternal donor of Chinese Elymus (Triticeae: Poaceae) inferred from chloroplast trnH-psbA sequences

Biochemical Systematics and Ecology, 2016
Abstract Hybridization and polyploidization can be major mechanisms for plant evolution and speciation. Thus, the process of polyploidization and evolutionary history of polyploids is of widespread interest. The chloroplast DNA regions trnH-psbA was used to analyze to phylogenetic relationships and maternal donor of Elymus species and their closely ...
Gang Gao   +6 more
openaire   +1 more source

A molecular phylogenetic study of Hemsleya (Cucurbitaceae) based on ITS, rpl16, trnH-psbA, and trnL DNA sequences

Plant Systematics and Evolution, 2010
This paper presents the first molecular phylogeny of the genus Hemsleya using nuclear ITS and plastid trnH-psbA, rpl16, and trnL DNA sequences to examine the relationships among Hemsleya species. Phylogenetic relationships were elucidated using a combined analysis of all four datasets, however, the number of parsimony-informative characters was still ...
Hong-Tao Li   +4 more
semanticscholar   +2 more sources

Molecular authentication and phytochemical assessment of Ruscus hyrcanus Woron. (Asparagaceae) based on trnH- psbA barcoding and HPLC-PDA analysis

Biocatalysis and Agricultural Biotechnology, 2020
Abstract Ruscus hyrcanus Woron., a valuable medicinal plant belongs to the Asparagaceae, is growing in the forests of Hyrcanian ecoregion in northern of Iran. In the present study, molecular authentication of the plant was studied. Four taxa of Ruscus L. along with some species from the genus Danae racemosa and Maianthemum japonicum were selected and
Salimeh Ghorbani   +3 more
openaire   +1 more source

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