Results 161 to 170 of about 27,797 (299)

The colonic mucosal virome in inflammatory bowel disease reveals Crassvirales depletion and disease-specific virome features

Gut Microbes
The mucosal virome is increasingly recognized for its potential role in shaping intestinal health and disease. Building on previous findings, we analyzed the mucosal virome from 51 individuals, including newly diagnosed treatment naïve participants with ...
Austin Yan, James Butcher, David R. Mack, Alain Stintzi   +3 more
doaj   +1 more source

VIBRANT: Automated recovery, annotation and curation of microbial viruses, and evaluation of virome function from genomic sequences [PDF]

, 2019
Kristopher Kieft, Zhichao Zhou, Karthik Anantharaman   +2 more
openalex   +1 more source

An efficient metatranscriptomic approach for capturing RNA virome and its application to SARS-CoV-2

, 2021
Yao Meng, Liwen Xiao, Wenbing Chen, Fangqing Zhao, Xiang Zhao   +4 more
openalex   +2 more sources

The Gut Virome Database Reveals Age-Dependent Patterns of Virome Diversity in the Human Gut

Cell Host and Microbe, 2020
Ann C. Gregory, Olivier Zablocki, A. Zayed, Allison Howell, B. Bolduc, M. Sullivan   +5 more
semanticscholar   +1 more source

Discovering and exploring the hidden diversity of human gut viruses using highly enriched virome samples

bioRxiv
Viruses are an abundant and crucial component of the human microbiome, but accurately discovering them via metagenomics is still challenging. Currently, the available viral reference genomes poorly represent the diversity in microbiome samples, and ...
Moreno Zolfo, A. Silverj, A. Blanco-Míguez, P. Manghi, Omar Rota-Stabelli, Vitor Heidrich, Jordan Jensen, Sagun Maharjan, E. Franzosa, C. Menni, A. Visconti, Federica Pinto, Matteo Ciciani, Curtis Huttenhower, A. Cereseto, F. Asnicar, Hiroaki Kitano, Takuji Yamada, N. Segata   +18 more
semanticscholar   +1 more source

Fasta and phylogenetic tree files of Virome of illegally trafficked Malayan pangolins reveal pangolin-associated viral lineages and infection with known pathogens of humans

, 2022
Jiajing Zheng
openalex   +1 more source

Longitudinal cervicovaginal bacteriome and virome alterations associate with discordant shedding and ART duration in women living with HIV in Peru

Nature Communications
Despite successful suppression of plasma HIV replication by antiretroviral therapy (ART), some women living with HIV (WLHIV) can still experience genital HIV shedding (discordant shedding).
Emily A. Kaelin, Caroline Mitchell, Jaime Soria, Alberto La Rosa, Eduardo Ticona, Robert W. Coombs, Lisa M. Frenkel, Marta E. Bull, Efrem S. Lim   +8 more
doaj   +1 more source

Exploring the gut virome in fecal immunochemical test stool samples reveals novel associations with lifestyle in a large population-based study [PDF]

, 2023
Paula Istvan, Einar Birkeland, Ekaterina Avershina, Ane Sørlie Kværner, Vahid Bemanian, Willem M. de Vos, Torbjørn Rognes, Paula Berstad, Trine B. Rounge   +8 more
openalex   +1 more source

Mining the virome for insights into type 1 diabetes [PDF]

, 2018
Park, Arnold, Zhao, Guoyan
core   +2 more sources

Exploring within-host diversity of plant viruses in rice agrosystems using two high-throughput sequencing strategies [PDF]

, 2018
The virome is an essential component of the phytobiome as viruses correspond to the most abundant and diverse biological entity in Nature and interact with all living organisms. The recent advances in high-throughput sequencing (HTS) has proven efficient
Dereeper, Alexis, Fargette, Denis, Fernandez, Emmanuel, Filloux, Denis, Hebrard, Eugénie, Hubert, Judith, Julian, Charlotte, Pinel-Galzi, Agnès, Poulicard, Nils, Roumagnac, Philippe   +9 more
core