Unexpected lower level of oral periodontal pathogens in patients with high numbers of systemic diseases

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Microbiology

Main article text

 

Introduction

Material & Methods

Sample collection, DNA extraction, and sequencing

Statistical analysis

Results

Clinical features of the study group

Periodontal pathogens associated with periodontal disease

Advanced periodontal disease subgroup

Oral bacterial taxa associated with lack of systemic disease and conditions among a subpopulation all with advanced periodontal disease

Bacterial taxa associated with oral microbiome linked systemic diseases

Control experiment to determine association of multiple medication usage with oral bacteria in a population with mild or no periodontal disease

Discussion

Conclusion

Supplemental Information

Total systemic diseases/conditions

DOI: 10.7717/peerj.15502/supp-1

Use of multivariable analysis to compare microbial abundance and periodontal disease stage among 201 subjects

DOI: 10.7717/peerj.15502/supp-2

Demographics of the subset of 117 subjects with none to moderate periodontal disease

DOI: 10.7717/peerj.15502/supp-3

Raw Data: Taxa Abundance Table and Metadata Table

DOI: 10.7717/peerj.15502/supp-4

Additional Information and Declarations

Competing Interests

The authors declare there are no competing interests.

Author Contributions

Michael T. Shen conceived and designed the experiments, performed the experiments, analyzed the data, prepared figures and/or tables, authored or reviewed drafts of the article, and approved the final draft.

Betti Shahin conceived and designed the experiments, performed the experiments, authored or reviewed drafts of the article, and approved the final draft.

Zhengjia Chen analyzed the data, authored or reviewed drafts of the article, and approved the final draft.

Guy R. Adami conceived and designed the experiments, performed the experiments, analyzed the data, prepared figures and/or tables, authored or reviewed drafts of the article, and approved the final draft.

Human Ethics

The following information was supplied relating to ethical approvals (i.e., approving body and any reference numbers):

University of Illinois Institutional Review Board 1 granted Ethical approval to do this study.

Data Availability

The following information was supplied regarding data availability:

The data is available at National Center for Biotechnology Information Sequence Read Archive: PRJNA739492 and PRJNA674379.

Funding

This work was funded by the Department of Oral Medicine and Diagnostic Sciences University of Illinois Chicago, College of Dentistry. The Research Open Access Publishing (ROAAP) Fund of the University of Illinois Chicago provided financial support towards the open access publishing fee for this article. The research reported in this publication was supported in part by the University of Illinois Cancer Center Biostatistics Shared Resource (BSR). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

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