Results 21 to 30 of about 282,753 (347)

Identifying Quantitative Trait Loci and Candidate Genes Conferring Resistance to Soybean Mosaic Virus SC7 by Quantitative Trait Loci-Sequencing in Soybean

Frontiers in Plant Science, 2022
Soybean mosaic virus (SMV) is detrimental to soybean (Glycine max) breeding, seed quality, and yield worldwide. Improving the basic resistance of host plants is the most effective and economical method to reduce damage from SMV.
Yong Zhang, Jiling Song, Lei Wang, Mengping Yang, Kaifeng Hu, Weiwei Li, Xuhong Sun, Hong Xue, Quanzhong Dong, Mingming Zhang, Shubao Lou, Xingyong Yang, Hao Du, Yongli Li, Lidong Dong, Zhijun Che, Qun Cheng   +16 more
doaj   +1 more source

InDelGT: An integrated pipeline for extracting indel genotypes for genetic mapping in a hybrid population using next‐generation sequencing data

Applications in Plant Sciences, Volume 10, Issue 6, November-December 2022., 2022
Abstract Premise Although several software packages are available for genotyping insertion/deletion (indel) polymorphisms in genomes using next‐generation sequencing data, simultaneously calling indel genotypes across many individuals for use in genetic mapping remains challenging. Methods and Results We present an integrated pipeline, InDelGT, for the
Zhiliang Pan, Jinpeng Zhang, Shengjun Bai, Zhiting Li, Chunfa Tong   +4 more
wiley   +1 more source

Genetic interactions contribute less than additive effects to quantitative trait variation in yeast. [PDF]

, 2015
Genetic mapping studies of quantitative traits typically focus on detecting loci that contribute additively to trait variation. Genetic interactions are often proposed as a contributing factor to trait variation, but the relative contribution of ...
Albert, Frank W, Bloom, Joshua S, Kotenko, Iulia, Kruglyak, Leonid, Sadhu, Meru J, Treusch, Sebastian   +5 more
core   +1 more source

Multiple locus linkage analysis of genomewide expression in yeast. [PDF]

, 2005
With the ability to measure thousands of related phenotypes from a single biological sample, it is now feasible to genetically dissect systems-level biological phenomena.
Akey, Joshua M, Kruglyak, Leonid, Storey, John D   +2 more
core   +4 more sources

R/qtl2: Software for Mapping Quantitative Trait Loci with High-Dimensional Data and Multiparent Populations

Genetics, 2018
R/qtl2 is an interactive software environment for mapping quantitative trait loci (QTL) in experimental populations. The R/qtl2 software expands the scope of the widely-used R/qtl software package to include multiparental populations, better handles ...
K. Broman, D. Gatti, P. Simecek, N. Furlotte, P. Prins, Ś. Sen, B. Yandell, G. Churchill   +7 more
semanticscholar   +1 more source

Single nucleotide polymorphisms in the CDH18 gene affect growth traits in Hu sheep

Animal Research and One Health, EarlyView., 2023
Abstract Growth traits are critical economic traits in sheep. Genetic polymorphism has a great influence on the improvement of sheep traits. The aim of this study was to analyze the effect of cadherin 18 (CDH18) gene polymorphisms on growth traits in Hu sheep.
Tianyi Liu, Yazhen Bi, Jingjing Bao, Mingyu Shang, Wenping Hu, Li Zhang   +5 more
wiley   +1 more source

Quantitative Trait Locus and Genetical Genomics Analysis Identifies Putatively Causal Genes for Fecundity and Brooding in the Chicken

G3: Genes, Genomes, Genetics, 2016
Life history traits such as fecundity are important to evolution because they make up components of lifetime fitness. Due to their polygenic architectures, such traits are difficult to investigate with genetic mapping.
Martin Johnsson, Kenneth B. Jonsson, Leif Andersson, Per Jensen, Dominic Wright   +4 more
doaj   +1 more source

QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations.

The Plant Journal, 2013
The majority of agronomically important crop traits are quantitative, meaning that they are controlled by multiple genes each with a small effect (quantitative trait loci, QTLs).
H. Takagi, A. Abe, Kentaroh Yoshida, S. Kosugi, S. Natsume, Chikako Mitsuoka, Aiko Uemura, Hiroe Utsushi, Muluneh Tamiru, Shohei Takuno, H. Innan, L. Cano, S. Kamoun, R. Terauchi   +13 more
semanticscholar   +1 more source

Mapping and Validation of Quantitative Trait Loci for Root Architectural Traits in Rice (Oryza sativa) under Non-Stress and Salinity Stress Conditions

Tropical Agricultural Research, 2018
Root architectural traits are governed by many genes exhibiting polygenic inheritance. The dissection of the genetic basis of root traits could be achieved by mapping of quantitative trait loci (QTLs) using molecular markers.
D. R. Gimhani, B. P. Abhayawickrama, M. S. F. Saliha, N. S. Kottearachchi   +3 more
doaj   +1 more source

Leveraging molecular quantitative trait loci to understand the genetic architecture of diseases and complex traits

Nature Genetics, 2018
There is increasing evidence that many risk loci found using genome-wide association studies are molecular quantitative trait loci (QTLs). Here we introduce a new set of functional annotations based on causal posterior probabilities of fine-mapped ...
F. Hormozdiari, S. Gazal, Bryce van de Geijn, H. Finucane, C. Ju, Po-Ru Loh, A. Schoech, Yakir A. Reshef, Xuanyao Liu, L. O'Connor, A. Gusev, E. Eskin, A. Price   +12 more
semanticscholar   +1 more source