Taxonomy of anaerobic digestion microbiome reveals biases associated with the applied high throughput sequencing strategies [PDF]
, 2018 In the past few years, many studies investigated the anaerobic digestion microbiome by means of 16S rRNA amplicon sequencing. Results obtained from these studies were compared to each other without taking into consideration the followed procedure for ...
Angelidaki, Irini +4 more
core +3 more sources
Species Identification and Profiling of Complex Microbial Communities Using Shotgun Illumina Sequencing of 16S rRNA Amplicon Sequences [PDF]
, 2013 The high throughput and cost-effectiveness afforded by short-read sequencing technologies, in principle, enable researchers to perform 16S rRNA profiling of complex microbial communities at unprecedented depth and resolution. Existing Illumina sequencing
Hibberd, Martin Lloyd +7 more
core +4 more sources
Microvariation Artifacts Introduced by PCR and Cloning of Closely Related 16S rRNA Gene Sequences [PDF]
, 2001 A defined template mixture of seven closely related 16S-rDNA clones was used in a PCR-cloning experiment to assess and track sources of artifactual sequence variation in 16S rDNA clone libraries. At least 14% of the recovered clones contained aberrations.
Speksnijder, A.G.C.L. +5 more
core +3 more sources
Diversidad morfológica y molecular de los Unionidae (Mollusca, Bivalvia) de Portugal
Graellsia, 2013 Las náyades de la familia Unionidae tienen gran plasticidad fenotípica, lo que se refleja en la forma de su concha. Esta variabilidad morfológica ha sido causa de gran confusión en la taxonomía y sistemática del grupo.
J. Reis, A. Machordom, R. Araujo
doaj +1 more source
Ecology and Evolution, 2020 As microbiome research moves away from model organisms to wildlife, new challenges for microbiome high‐throughput sequencing arise caused by the variety of wildlife diets.
Luis Víquez‐R +4 more
doaj +1 more source
Novel hemotropic mycoplasmas are widespread and genetically diverse in vampire bats [PDF]
, 2017 Bats (Order: Chiroptera) have been widely studied as reservoir hosts for viruses of concern for human and animal health. However, whether bats are equally competent hosts of non-viral pathogens such as bacteria remains an important open question. Here,
Altizer, S.M. +7 more
core +1 more source
Manglar, 2018 Los insectos plaga, conocidos como trips del banano (Chaetanaphothrips signipennis y Frankliniella parvula), vienen causando serios daños económicos al sector bananero de la costa norte del Perú.
Néstor Díaz-Castillo +6 more
doaj +1 more source
Frontiers in Microbiology, 2023 The Lactobacillaceae are lactic acid bacteria harnessed to deliver important outcomes across numerous industries, and their unambiguous, species-level identification from mixed community environments is an important endeavor.
Sandra A. Olivier +9 more
doaj +1 more source
Characterization of the human tumor microbiome reveals tumor-type specific intra-cellular bacteria
OncoImmunology, 2020 Many characteristics of cancer such as proliferation, survival, progression, immunogenicity, sensitivity, and resistance to therapy are not just endogenously driven by the tumor cells themselves, but are greatly affected by their interaction with the ...
Ilana Livyatan +3 more
doaj +1 more source
Diversity of culturable moderately halophilic and halotolerant bacteria in a marsh and two salterns a protected ecosystem of Lower Loukkos (Morocco) [PDF]
, 2012 To study the biodiversity of halophilic bacteria in a protected wetland located in Loukkos (Northwest, Morocco), a total of 124 strains were recovered from sediment samples from a marsh and salterns.
Amar, Mohamed +7 more
core +1 more source