Results 21 to 30 of about 39,026,673 (120)

Phylogenetic Position of Aquificales Based on the Whole Genome Sequences of Six Aquificales Species

International Journal of Evolutionary Biology, Volume 2012, Issue 1, 2012., 2012
Species belonging to the order Aquificales are believed to be an early branching lineage within the Bacteria. However, the branching order of this group in single‐gene phylogenetic trees is highly variable; for example, it has also been proposed that the Aquificales should be grouped with ε‐proteobacteria.
Kenro Oshima, Yoko Chiba, Yasuo Igarashi, Hiroyuki Arai, Masaharu Ishii, Hiromi Nishida   +5 more
wiley   +1 more source

Metabolic and Molecular Events Occurring during Chromoplast Biogenesis

Journal of Botany, Volume 2011, Issue 1, 2011., 2011
Chromoplasts are nonphotosynthetic plastids that accumulate carotenoids. They derive from other plastid forms, mostly chloroplasts. The biochemical events responsible for the interconversion of one plastid form into another are poorly documented. However, thanks to transcriptomics and proteomics approaches, novel information is now available.
Wanping Bian, Cristina Barsan, Isabel Egea, Eduardo Purgatto, Christian Chervin, Mohamed Zouine, Alain Latché, Mondher Bouzayen, Jean-Claude Pech, William K. Smith   +9 more
wiley   +1 more source

Unique Evolution of Symbiobacterium thermophilum Suggested from Gene Content and Orthologous Protein Sequence Comparisons

International Journal of Evolutionary Biology, Volume 2011, Issue 1, 2011., 2011
Comparisons of gene content and orthologous protein sequence constitute a major strategy in whole‐genome comparison studies. It is expected that horizontal gene transfer between phylogenetically distant organisms and lineage‐specific gene loss have greater influence on gene content‐based phylogenetic analysis than orthologous protein sequence‐based ...
Kenro Oshima, Kenji Ueda, Teruhiko Beppu, Hiromi Nishida, Hideaki Nojiri   +4 more
wiley   +1 more source

Pathway of phenylalanine, tyrosine and tryptophan biosynthesis and putative pathway of indican biosynthesis and metabolism.

, 2019
The red word in the figure shows the genes involved in tryptophan biosynthesis, the blue shows the genes involved in indican biosynthesis and metabolism.
Shuju Ning (5484932), Xiaogui Gong (6453707), Wei Huang (36889), Daozhi Wei (5484926), Wenjin Lin (5484929), Qi Ye (243032)   +5 more
core   +1 more source

Attenuated Strains of Pseudomonas aeruginosa: A Promising Cell Factory for Rhamnolipid Production

Microbial Biotechnology, Volume 18, Issue 11, November 2025.
PGN strains are generated by the deletion of virulence factor genes. The metabolic pathways and regulatory frameworks that lead to high‐efficiency production of rhamnolipids in P. aeruginosa are preserved in these strains. Therefore, PGN strains are promising bio‐safe cell factories for the industrial production of rhamnolipids.
Parvathy V. Das, Meagan E. Valentine, Timothy E. Long, Hongwei D. Yu   +3 more
wiley   +1 more source

Bioinformatic analysis of 41 publicly available Enterococcus genomes for 14 enzymes in shikimate and tryptophan metabolism pathways.

, 2019
Predicted presence/absence matrix for each enzyme (shikimate and tryptophan metabolism pathways) found in at least one of the 41 sequenced Enterococcus genomes, with pathways and isolate genomes arranged by unsupervised hierarchical clustering (A ...
Aaron M. T. Barnes (7164341), Patricia Ferrieri (708899), Robin R. Shields-Cutler (5128196), Todd E. DeFor (7164344), Gary M. Dunny (233846), Maryam Ebadi (4705804), Kathryn Kruziki (7164335), Dan Knights (103804), Daniel J. Weisdorf (7164350), Dawn A. Manias (7164338), Armin Rashidi (3321966), Jo-Anne H. Young (7164347), Bruce R. Blazar (357831)   +12 more
core   +1 more source

Production‐optimized fermentation of antifungal compounds by Bacillus velezensis LZN01 and transcriptome analysis

Microbial Biotechnology, Volume 17, Issue 10, October 2024.
The yields of antimicrobial compounds, such as surfactin, fengycin, shikimic acid, and myriocin, increased or were observed in the optimized fermentation CFS. In conclusion, fermentation conditions improved the antifungal activity of the LZN01 strain and influenced the expression of genes involved in the synthesis of antimicrobial compounds.
Jiale Hu, Zhigang Wang, Weihui Xu
wiley   +1 more source

Mutualistic interactions of lactate‐producing lactobacilli and lactate‐utilizing Veillonella dispar: Lactate and glutamate cross‐feeding for the enhanced growth and short‐chain fatty acid production

Microbial Biotechnology, Volume 17, Issue 5, May 2024.
The study investigates the symbiotic interaction between Veillonella dispar and three lactic acid bacteria strains, revealing a robust mutualism primarily with Lactobacillus acidophilus. Through co‐culture experiments and transcriptomic analysis, the research elucidates a complex metabolic relationship involving cross‐feeding of lactate and glutamate ...
Shi‐Min Zhang, Jia‐He Hung, Tran Ngoc Yen, Shir‐Ly Huang   +3 more
wiley   +1 more source

Clinical Outcomes and Toxicity of CT-guided High Dose-rate Brachytherapy in Women With Locally-advanced Cervical Cancer [PDF]

, 2023
Background/Aim: To evaluate the outcome and toxicities in patients with locally advanced cervical cancer (LACC) treated with radiochemotherapy and intracavitary brachytherapy.
2 ALESSIA NARDANGELI, 3 FRANCESCA TORTORETO, 4 IVAN ANNESSI, 1 GIUSEPPE FACONDO, 3 PIERCARLO GENTILE, 4 VITTORIO DONATO, VITALIANA DE SANCTIS, 6 FRANCESCA DE FELICE, 1 DIMITRI ANZELLINI, 1 and MATTIA FALCHETTO OSTI1, 5 CINZIA CHIOSTRINI, 2 LUCA MARMIROLI, 6 MAURIZIO VALERIANI, 5 VINCENZO TOMBOLINI, 1 GIUSEPPE SANGUINETI, 1 GIANLUCA VULLO   +15 more
core   +1 more source

Pathways for starch synthesis, glycolysis, aromatic amino acid synthesis and the TCA cycle.

, 2014
Enzymes that are involved in these pathways are labeled with colors that indicate the fold change (log2) in their transcript levels in urea-grown cells relative to nitrate-grown cells (color code is provided in the figure).
Jing-Yi Cen (648108), Kai-Xuan Huang (648105), Yue-Lei Dong (648109), Hua-Long Wang (648106), Song-Hui Lu (648107), Hong-Po Dong (648104)   +5 more
core   +1 more source