Results 51 to 60 of about 133,110 (277)

Analysing the significance of small conformational changes and low occupancy states in serial crystallographic data

open access: yesFEBS Open Bio, EarlyView.
This protocol paper outlines methods to establish the success of a time‐resolved serial crystallographic experiment, by means of statistical analysis of timepoint data in reciprocal space and models in real space. We show how to amplify the signal from excited states to visualise structural changes in successful experiments.
Jake Hill   +4 more
wiley   +1 more source

Characterization of Unique Solvability of Absolute Value Equations: An Overview, Extensions, and Future Directions

open access: yes, 2023
This paper provides an overview of the necessary and sufficient conditions for guaranteeing the unique solvability of absolute value equations. In addition to discussing the basic form of these equations, we also address several generalizations ...
Moosaei, Hossein   +3 more
core  

A generalization of the Newton-based matrix splitting iteration method for generalized absolute value equations

open access: yes, 2023
A generalization of the Newton-based matrix splitting iteration method (GNMS) for solving the generalized absolute value equations (GAVEs) is proposed. Under mild conditions, the GNMS method converges to the unique solution of the GAVEs. Moreover, we can
Chen, Cairong, Li, Xuehua
core   +1 more source

On the modified Hermitian and skew-Hermitian splitting iteration methods for a class of weakly absolute value equations

open access: yesJournal of Inequalities and Applications, 2016
In this paper, based on the modified Hermitian and skew-Hermitian splitting (MHSS) iteration method, the nonlinear MHSS-like iteration method is presented to solve a class of the weakly absolute value equations (AVE).
Cui-Xia Li
doaj   +1 more source

YlmG1 is localized exclusively to the chloroplast envelope membrane and is involved in preprotein translocation in Arabidopsis thaliana

open access: yesFEBS Open Bio, EarlyView.
Cytosolically synthesized chloroplast preproteins are translocated across the outer and inner envelope membranes through translocons called TOC and TIC, respectively. In green algae and plants, the TIC core is composed of essential membrane proteins, Tic12, Tic20, and Tic214.
Mengyi Li, Xueyang Zhao, Masato Nakai
wiley   +1 more source

Symmetric SOR Method for Absolute Complementarity Problems

open access: yesJournal of Applied Mathematics, 2013
We study symmetric successive overrelaxation (SSOR) method for absolute complementarity problems. Solving this problem is equivalent to solving the absolute value equations. Some examples are given to show the implementation and efficiency of the method.
Javed Iqbal, Muhammad Arif
doaj   +1 more source

Molecular dynamics simulations of positively selected codons in FcγRI reveal novel biochemical binding properties

open access: yesFEBS Open Bio, EarlyView.
Evolutionary analysis across 32 placental mammals identified positive selection at residues H148 and W149 in the immune receptor FcγR1. Ancestral reconstruction combined with molecular dynamics simulations reveals how these mutations may influence receptor structure and dynamics, providing insight into the evolution of antibody recognition and immune ...
David A. Young   +7 more
wiley   +1 more source

A simultaneous equation model to determine taper curve.

open access: yesSilva Fennica, 1978
A simultaneous equation model to determine taper curve for Scots pine is presented. The diameters at relative heights are endogenous variables and height an exogenous variable. Any equations may be substituted by the measured value of diameter.
Kilkki, Pekka   +2 more
doaj   +1 more source

Refinement of amino‐acid conformation vs. difference density maps in time‐resolved serial femtosecond crystallography data analysis

open access: yesFEBS Open Bio, EarlyView.
The dFoCC pipeline starts with observed DED and resting‐state coordinates, which are then used to generate a library of triggered states. Correlation analysis of the calculated DED features of each candidate vs observed DED permits quantitative evaluation of candidate structural quality.
Meng Iao Fong   +3 more
wiley   +1 more source

Solving Nonlinear Absolute Value Equations

open access: yes
In this work we show that several problems naturally modeled as Nonlinear Absolute Value Equations (NAVE), can be restated as Nonlinear Complementarity Problems (NCP) and solved efficiently using smoothing regularizing techniques under mild assumptions ...
Daniilidis, Aris   +3 more
core   +2 more sources

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