Results 11 to 20 of about 1,611,042 (316)
Frontiers in Plant Science, 2021 Aligning short-read sequences is the foundational step to most genomic and transcriptomic analyses, but not all tools perform equally, and choosing among the growing body of available tools can be daunting.
Ryan Musich +3 more
doaj +1 more source
Recent developments in the MAFFT multiple sequence alignment program
Briefings in Bioinformatics, 2008 Kazutaka Katoh +2 more
exaly +2 more sources
Nanomaterials, 2022 The alignment of nanowires (NWs) has been actively pursued for the production of electrical devices with high-operating performances. Among the generally available alignment processes, spin-coating is the simplest and fastest method for uniformly ...
Giwon Lee +6 more
doaj +1 more source
MP-Align: alignment of metabolic pathways [PDF]
BMC Systems Biology, 2014 Abstract Background Comparing the metabolic pathways of different species is useful for understanding metabolic functions and can help in studying diseases and engineering drugs. Several comparison techniques for metabolic pathways have been introduced in the literature as a first attempt in this direction.
Ricardo Alberich +4 more
openaire +3 more sources
Review and Alignment of Domain-Level Ontologies for Materials Science
IEEE Access, 2023 The growing complexity and interdisciplinary nature of Materials Science research demand efficient data management and exchange through structured knowledge representation.
Anne De Baas +10 more
doaj +1 more source
Align, then memorise: the dynamics of learning with feedback alignment* [PDF]
Journal of Statistical Mechanics: Theory and Experiment, 2022 Abstract Direct feedback alignment (DFA) is emerging as an efficient and biologically plausible alternative to backpropagation for training deep neural networks. Despite relying on random feedback weights for the backward pass, DFA successfully trains state-of-the-art models such as transformers. On the other hand,
Refinetti, Maria +3 more
openaire +6 more sources
Statistical Analysis of Track Geometry Parameters on Tramway Line No. 1 in Budapest
The Baltic Journal of Road and Bridge Engineering, 2022 The article examines the superstructures of the tramway tracks of tramway line No. 1 in Budapest (the capital of Hungary). Since the first appearance of tramways, several technological advancements have been made to serve passenger needs as efficiently ...
Vivien Jover, Szabolcs Fischer
doaj +1 more source
The whole alignment and nothing but the alignment: the problem of spurious alignment flanks [PDF]
Nucleic Acids Research, 2008 Pairwise sequence alignment is a ubiquitous tool for inferring the evolution and function of DNA, RNA and protein sequences. It is therefore essential to identify alignments arising by chance alone, i.e. spurious alignments. On one hand, if an entire alignment is spurious, statistical techniques for identifying and eliminating it are well known. On the
Frith, Martin C. +3 more
openaire +2 more sources
Graph-Based Genome Alignment and Genotyping with HISAT2 and HISAT-genotype
Nature Biotechnology, 2019 The human reference genome represents only a small number of individuals, which limits its usefulness for genotyping. We present a method named HISAT2 (hierarchical indexing for spliced alignment of transcripts 2) that can align both DNA and RNA ...
Daehwan Kim +4 more
semanticscholar +1 more source
BeaverTails: Towards Improved Safety Alignment of LLM via a Human-Preference Dataset [PDF]
Neural Information Processing Systems, 2023 In this paper, we introduce the \textsc{BeaverTails} dataset, aimed at fostering research on safety alignment in large language models (LLMs). This dataset uniquely separates annotations of helpfulness and harmlessness for question-answering pairs, thus ...
Jiaming Ji +8 more
semanticscholar +1 more source