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Landscape of extracellular small RNA and identification of biomarkers in multiple human cancers. [PDF]
Zhan S +16 more
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The 6-methyladenine erasers ALKBH5 and FTO influence chemotherapy efficiency in bladder cancer cell lines. [PDF]
Drigeard Desgarnier MC +3 more
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RNA modifications: molecular orchestrators of wound healing. [PDF]
Guo X +8 more
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DNA repair by bacterial AlkB proteins
Research in Microbiology, 2003The Escherichia coli AlkB protein is an iron- and 2-oxoglutarate-dependent oxygenase, repairing 1-methyladenine and 3-methylcytosine lesions in DNA. AlkB homologues are present in a number of bacterial species, and some bacteria have two different AlkB proteins.
Pal Falnes, Torbjørn Rognes
exaly +3 more sources
Structure and Function of Alkane Monooxygenase (AlkB)
Accounts of Chemical Research, 2023Every year, perhaps as much as 800 million tons of hydrocarbons enters the environment; alkanes make up a large percentage of it. Most are transformed by organisms that utilize these molecules as sources of energy and carbon. Both aerobic and anaerobic alkane transformation chemistries exist, capitalizing on the presence of alkanes in both oxic and ...
John T. Groves +2 more
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AlkB demethylases flip out in different ways
DNA Repair, 2008Aberrant methylations in DNA are repaired by base excision repair (BER) and direct repair by a methyltransferase or by an oxidative demethylase of the AlkB type. Yang et al. [Nature 452 (2008) 961-966] have now solved the crystal structure of AlkB and human AlkB homolog 2 (hABH2) in complex with DNA using an ingenious crosslinking strategy to stabilize
Geir Slupphaug +2 more
exaly +3 more sources
alkB homologs in thermophilic bacteria of the genus Geobacillus
Molecular Biology, 2008Screening of alkane hydroxylase genes (alkB) was performed in the thermophilic aerobic bacteria of the genus Geobacillus. Total DNA was extracted from the biomass of 11 strains grown on the mixture of saturated C10-C20 hydrocarbons, PCR amplification of fragments of alkB genes was performed with degenerate oligonucleotide primers, PCR products were ...
Tamara Nazina +2 more
exaly +3 more sources
Research in Microbiology, 2002
Pseudomonas aeruginosa strains that grow on crude oil as the sole source of carbon and energy were isolated from an environment in Morocco polluted by petroleum refinery effluents. The twenty isolates grew on saturated alkanes from C12 to C22. Three of the isolates were also able to grow on low molecular weight C6 to C10 n-alkanes, but the other 17 ...
Abdelhaq, Belhaj +2 more
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Pseudomonas aeruginosa strains that grow on crude oil as the sole source of carbon and energy were isolated from an environment in Morocco polluted by petroleum refinery effluents. The twenty isolates grew on saturated alkanes from C12 to C22. Three of the isolates were also able to grow on low molecular weight C6 to C10 n-alkanes, but the other 17 ...
Abdelhaq, Belhaj +2 more
openaire +4 more sources
Aberrant activity of the DNA repair enzyme AlkB
Journal of Inorganic Biochemistry, 2004Escherichia coli AlkB is a DNA/RNA repair enzyme containing a mononuclear Fe(II) site that couples the oxidative decomposition of alpha-ketoglutarate (alphaKG) to the hydroxylation of 1-methyladenine or 3-methylcytosine lesions in DNA or RNA, resulting in release of formaldehyde and restoration of the normal bases.
Timothy F, Henshaw +2 more
openaire +2 more sources

