Kernel density estimation of allele frequency including undetected alleles [PDF]
PeerJWhereas undetected species contribute to estimation of species diversity, undetected alleles have not been used to estimated genetic diversity. Although random sampling guarantees unbiased estimation of allele frequency and genetic diversity measures ...
Satoshi Aoki, Keita Fukasawa
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Empirical distributions of F(ST) from large-scale human polymorphism data. [PDF]
PLoS ONE, 2012 Studies of the apportionment of human genetic variation have long established that most human variation is within population groups and that the additional variation between population groups is small but greatest when comparing different continental ...
Eran Elhaik
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Enrichment of rare alleles within epigenetic chromatin marks in the first intron [PDF]
Genomics & Informatics, 2019 In previous studies, we demonstrated that some sites in the first intron likely regulate gene expression. In the present work, we sought to further confirm the functional relevance of first intron sites by estimating the quantity of rare alleles in the ...
Shin-Sang Jo, Sun Shim Choi
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Allele Frequencies Database [PDF]
Transfusion Medicine and Hemotherapy, 2014 This review describes a database for the collection, archiving, sorting, searching and display of gene and allele frequencies for immunogenetic genes.
Louise Y C, Takeshita +3 more
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Confirming putative variants at ≤ 5% allele frequency using allele enrichment and Sanger sequencing
Scientific Reports, 2021 Whole exome sequencing (WES) is used to identify mutations in a patient’s tumor DNA that are predictive of tumor behavior, including the likelihood of response or resistance to cancer therapy. WES has a mutation limit of detection (LoD) at variant allele
Yan Helen Yan +6 more
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High throughput automated allele frequency estimation by pyrosequencing. [PDF]
PLoS ONE, 2008 Pyrosequencing is a DNA sequencing method based on the principle of sequencing-by-synthesis and pyrophosphate detection through a series of enzymatic reactions.
Julie Doostzadeh +8 more
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Tikrit Journal of Pure Science, 2023 A genetic study for the trait of Darwin's tubercle in two ways : first , on a sample consisted of 52 family from Tikrit city in governorate Salah AL-Dein and 125 individual from their sons and 63 family from governorate of Kirkuk and 188 individual from
Adel Fawzy Shihab, Marwa Amer Shakir
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ALLELE FREQUENCY OF GLUTENIN SUBUNITS AND GLU-1 QUALITY SCORES IN SOME TURKISH BREAD WHEAT LANDRACES
Trakya University Journal of Natural Sciences, 2020 There are eight centers of origin for cultivated plants and Turkey is located in the interception of two of these centers, the Near East and the Mediterranean.
Ridvan Temızgul, Mikail Akbulut
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The Impact of Variant Allele Frequency in EGFR Mutated NSCLC Patients on Targeted Therapy
Frontiers in Oncology, 2021 EGFR mutations represent the most common currently targetable oncogenic driver in non-small cell lung cancer. There has been tremendous progress in targeting this alteration over the course of the last decade, and third generation tyrosine kinase ...
Alex Friedlaender +4 more
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Disparities in allele frequencies and population differentiation for 101 disease-associated single nucleotide polymorphisms between Puerto Ricans and Non-Hispanic Whites [PDF]
, 2009 BACKGROUND. Variations in gene allele frequencies can contribute to differences in the prevalence of some common complex diseases among populations. Natural selection modulates the balance in allele frequencies across populations.
Adiconis, Xian +9 more
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