Genomic landscape of the OsTPP7 gene in its haplotype diversity and association with anaerobic germination tolerance in rice [PDF]
Frontiers in Plant Science, 2023 Early season flooding is a major constraint in direct-seeded rice, as rice genotypes vary in their coleoptile length during anoxia. Trehalose-6-phosphate phosphatase 7 (OsTPP7, Os09g0369400) has been identified as the genetic determinant for anaerobic ...
Kyaw Myo Aung +11 more
doaj +5 more sources
Understanding anaerobic germination in direct-seeded rice: a genomic mapping approach [PDF]
BMC Plant BiologyBackground Anaerobic germination is a critical trait for rice cultivation, particularly in regions that experience flooding or waterlogging immediately after sowing. Under direct-seeded conditions, where rice is sown directly into the field without prior
Vikas Kumar Verma, Nitika Sandhu
doaj +5 more sources
The Relationship between Anaerobic Germination Capacity and Submergence Tolerance in Rice Seedlings [PDF]
RiceDirect-seeded rice offers multiple advantages, including lower labour costs and a reduced CO2 footprint. However, the risk of flooding during germination and at the early seedling and vegetative stages is high.
Dina Lykke Engmann Djurhuus +8 more
doaj +5 more sources
Trait-based mapping to identify the genetic factors underlying anaerobic germination of rice: Phenotyping, GXE, and QTL mapping [PDF]
BMC Genetics, 2020 Background Anaerobic germination is one of the most important traits for rice under direct-seeded conditions. The trait reduces risk of crop failure due to waterlogged conditions after seeding and allows water to be used as a means of weed control.
Sharmistha Ghosal +5 more
doaj +5 more sources
Optimizing commercial Arabica coffee quality by integrating flavor precursors with anaerobic germination strategy [PDF]
Food Chemistry: XThis study attempted to improve commercial Arabica coffee quality by integrating flavor precursors with anaerobic germination. Using raw coffee beans as materials, anaerobic germination was conducted with 5 g/100 g of flavor precursors (sucrose, glucose,
Yanbing Wang +6 more
doaj +5 more sources
Identification of stable QTLs and candidate genes involved in anaerobic germination tolerance in rice via high-density genetic mapping and RNA-Seq [PDF]
BMC Genomics, 2019 Background Anaerobic germination tolerance is an important trait for direct-seeded rice varieties. Understanding the genetic basis of anaerobic germination is a key for breeding direct-seeded rice varieties.
Jing Yang +10 more
doaj +4 more sources
Anaerobic germination of green coffee beans: A novel strategy to improve the quality of commercial Arabica coffee [PDF]
Current Research in Food Science, 2023 This study aimed to improve the brewing quality of commercial Arabica coffee through anaerobic germination. Changes in important compounds and cupping scores of germination roasting coffee with different germination degrees were investigated by 1H NMR ...
Yanbing Wang +8 more
doaj +3 more sources
GWAS Combined with WGCNA of Transcriptome and Metabolome to Excavate Key Candidate Genes for Rice Anaerobic Germination [PDF]
Rice, 2023 Direct seeding of rice is a lightweight and simple cultivation method, which can effectively promote rice production. Anaerobic germination tolerance is one of the main traits of rice adaptability to direct seeding.
Dandan Li +15 more
doaj +3 more sources
Identification of Key Genes and Pathways for Anaerobic Germination Tolerance in Rice Using Weighted Gene Co-Expression Network Analysis (WGCNA) in Association with Quantitative Trait Locus (QTL) Mapping [PDF]
RiceBackground Rice is one of the most important food crops in the world, and with the development of direct seeding methods for rice, exposure to anaerobic stress has become a major factor limiting its growth.
Ming Yin +11 more
doaj +3 more sources
An epigenetic pathway in rice connects genetic variation to anaerobic germination and seedling establishment. [PDF]
Plant Physiol, 2021 Rice production is shifting from transplanting seedlings to direct sowing of seeds. Following heavy rains, directly sown seeds may need to germinate under anaerobic environments, but most rice (Oryza sativa) genotypes cannot survive these conditions.
Castano-Duque L +5 more
europepmc +4 more sources