Results 11 to 20 of about 712,778 (311)

ChatGPT outperforms crowd workers for text-annotation tasks [PDF]

open access: yesProceedings of the National Academy of Sciences of the United States of America, 2023
Many NLP applications require manual text annotations for a variety of tasks, notably to train classifiers or evaluate the performance of unsupervised models.
F. Gilardi, Meysam Alizadeh, M. Kubli
semanticscholar   +1 more source

Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation

open access: yesNucleic Acids Res., 2021
The Interactive Tree Of Life (https://itol.embl.de) is an online tool for the display, manipulation and annotation of phylogenetic and other trees. It is freely available and open to everyone.
Ivica Letunic, P. Bork
semanticscholar   +1 more source

eggNOG-mapper v2: Functional Annotation, Orthology Assignments, and Domain Prediction at the Metagenomic Scale

open access: yesbioRxiv, 2021
Even though automated functional annotation of genes represents a fundamental step in most genomic and metagenomic workflows, it remains challenging at large scales.
C. Cantalapiedra   +4 more
semanticscholar   +1 more source

DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update)

open access: yesNucleic Acids Res., 2022
DAVID is a popular bioinformatics resource system including a web server and web service for functional annotation and enrichment analyses of gene lists. It consists of a comprehensive knowledgebase and a set of functional analysis tools. Here, we report
Brad T. Sherman   +7 more
semanticscholar   +1 more source

Probabilistic harmonization and annotation of single‐cell transcriptomics data with deep generative models

open access: yesMolecular Systems Biology, 2021
As the number of single‐cell transcriptomics datasets grows, the natural next step is to integrate the accumulating data to achieve a common ontology of cell types and states.
Chenling Xu   +5 more
doaj   +1 more source

Comparative analysis of repeat content in plant genomes, large and small

open access: yesFrontiers in Plant Science, 2023
The DNA Features pipeline is the analysis pipeline at EMBL-EBI that annotates repeat elements, including transposable elements. With Ensembl’s goal to stay at the cutting edge of genome annotation, we proved that this pipeline needed an update.
Joris Argentin   +4 more
doaj   +1 more source

Artificial Intelligence in Surgical Training for Kidney Cancer: A Systematic Review of the Literature

open access: yesDiagnostics, 2023
The prevalence of renal cell carcinoma (RCC) is increasing due to advanced imaging techniques. Surgical resection is the standard treatment, involving complex radical and partial nephrectomy procedures that demand extensive training and planning ...
Natali Rodriguez Peñaranda   +20 more
doaj   +1 more source

Web Resources for SARS-CoV-2 Genomic Database, Annotation, Analysis and Variant Tracking

open access: yesViruses, 2023
The SARS-CoV-2 genomic data continue to grow, providing valuable information for researchers and public health officials. Genomic analysis of these data sheds light on the transmission and evolution of the virus.
Yexiao Cheng   +4 more
doaj   +1 more source

Adaptation and validation of two annotation scales for assessing social skills in a corpus of multimodal collaborative interactions

open access: yesFrontiers in Psychology, 2022
ContextBehavioral observation scales are important for understanding and assessing social skills. In the context of collaborative problem-solving (CPS) skills, considered essential in the 21st century, there are no validated scales in French that can be ...
Jennifer Hamet Bagnou   +3 more
doaj   +1 more source

dbCAN3: automated carbohydrate-active enzyme and substrate annotation

open access: yesNucleic Acids Res., 2023
Carbohydrate active enzymes (CAZymes) are made by various organisms for complex carbohydrate metabolism. Genome mining of CAZymes has become a routine data analysis in (meta-)genome projects, owing to the importance of CAZymes in bioenergy, microbiome ...
Jinfang Zheng   +5 more
semanticscholar   +1 more source

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