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A functional complementation of a cotton MIZU-KUSSEI1 homolog in the hydrotropism response of Arabidopsis thaliana roots [PDF]

open access: yesBMC Research Notes
Objective Plants control the direction of root growth toward moisture due to their sessile nature, a phenomenon known as hydrotropism. In Arabidopsis thaliana, the MIZU-KUSSEI1 (MIZ1) protein is essential for the hydrotropic response.
Su-Hwan Kwak, Wonkeun John Park
doaj   +2 more sources

The relationship between ethylene-induced autophagy and reactive oxygen species in Arabidopsis root cells during the early stages of waterlogging stress [PDF]

open access: yesPeerJ, 2023
The response of plants to waterlogging stress is a complex process, with ethylene playing a crucial role as a signaling molecule. However, it remains unclear how ethylene is initially triggered in response to waterlogging stress when plants are ...
Qiwei Zheng   +3 more
doaj   +2 more sources

Selection and functional identification of Dof genes expressed in response to nitrogen in Populus simonii × Populus nigra

open access: yesOpen Life Sciences, 2022
In plants, Dof transcription factors are involved in regulating the expression of a series of genes related to N uptake and utilization. Therefore, the present study investigated how DNA-binding with one finger (Dof) genes are expressed in response to ...
Wang Shenmeng   +2 more
doaj   +1 more source

Dual-transcriptomic datasets evaluating the effect of the necrotrophic fungus Alternaria brassicicola on Arabidopsis germinating seeds

open access: yesData in Brief, 2022
Many fungal pathogens are carried and transmitted by seeds. These pathogens affect germination and seed quality. Their transmission from the germinating seed to seedling causes many diseases in crops. Seed defense mechanisms during germination are poorly
Mailen Ortega-Cuadros   +5 more
doaj   +1 more source

A Shortest-Path-Based Method for the Analysis and Prediction of Fruit-Related Genes in Arabidopsis thaliana. [PDF]

open access: yesPLoS ONE, 2016
Biologically, fruits are defined as seed-bearing reproductive structures in angiosperms that develop from the ovary. The fertilization, development and maturation of fruits are crucial for plant reproduction and are precisely regulated by intrinsic ...
Liucun Zhu   +5 more
doaj   +1 more source

Investigation of Splicing Quantitative Trait Loci in [PDF]

open access: yesGenomics & Informatics, 2016
The alteration of alternative splicing patterns has an effect on the quantification of functional proteins, leading to phenotype variation. The splicing quantitative trait locus (sQTL) is one of the main genetic elements affecting splicing patterns. Here,
Wonseok Yoo   +3 more
doaj   +1 more source

Fluorescent-Dye-Labeled Amino Acids for Real-Time Imaging in Arabidopsis thaliana

open access: yesMolecules, 2023
Amino acid is the main transport form of reduced nitrogen in plants. To investigate the uptake and source–sink translocation process of plants to help understand their physiological roles and transport mechanisms, we designed and synthesized three ...
Yao Yuan, Fuxiang Cao, Guangming Yuan
doaj   +1 more source

Transcriptome Analysis Reveals the Response Mechanism of Digitaria sanguinalis, Arabidopsis thaliana and Poa annua under 4,8-Dihydroxy-1-tetralone Treatment

open access: yesPlants, 2023
4,8-dihydroxy-l-tetralone (4,8-DHT) is an allelochemical isolated from the outer bark of Carya cathayensis that acts as a plant growth inhibitor. In order to explore the mechanism of 4,8-DHT inhibiting weed activity, we treated three species of Digitaria
Qiumin Sun   +12 more
doaj   +1 more source

Basic Compatibility of Albugo candida in Arabidopsis thaliana and Brassica juncea Causes Broad-Spectrum Suppression of Innate Immunity

open access: yesMolecular Plant-Microbe Interactions, 2008
A biotrophic parasite often depends on an intrinsic ability to suppress host defenses in a manner that will enable it to infect and successfully colonize a susceptible host.
A. J. Cooper   +6 more
doaj   +1 more source

A ClearSee-Based Clearing Protocol for 3D Visualization of Arabidopsis thaliana Embryos

open access: yesPlants, 2021
Tissue clearing methods combined with confocal microscopy have been widely used for studying developmental biology. In plants, ClearSee is a reliable clearing method that is applicable to a wide range of tissues and is suitable for gene expression ...
Ayame Imoto   +6 more
doaj   +1 more source

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